HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:27.8 nTPM
HPA Brain:183.6 nTPM
GTEx:27.8 nTPM
FANTOM5:44.1 Scaled Tags Per Million
Pig:83.0 nTPM
Mouse:91.7 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012869
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 183.6
Sample id Sample description nTPM
Hippocampus
nTPM: 123.4
2148 Female, age 91, left hemisphere 194.3
1855 Male, age 76, left hemisphere 134.4
1898 Male, age 80, left hemisphere 130.2
2621 Female, age 67, right hemisphere 125.6
1911 Female, age 85, right hemisphere 80.9
2529 Female, age 94, left hemisphere 74.7
Dentate gyrus
nTPM: 138.2
1927 Female, age 91, both hemispheres 192.4
2531 Female, age 67, both hemispheres 166.9
2530 Female, age 94, left hemisphere 120.6
2246 Female, age 85, both hemispheres 120.3
2010 Male, age 76, both hemispheres 114.8
2528 Male, age 74, both hemispheres 114.2
Entorhinal gyrus
nTPM: 151.7
2613 Female, age 94, left hemisphere 217.1
2686 Male, age 75, right hemisphere 164.6
2764 Male, age 80, right hemisphere 162.2
1938 Female, age 85, left hemisphere 145.7
1787 Male, age 76, left hemisphere 138.2
2117 Female, age 91, right hemisphere 82.5
Hippocampus, CA1
nTPM: 136.5
2045 Male, age 76, both hemispheres 167.6
2749 Male, age 80, left hemisphere 154.6
1873 Female, age 85, both hemispheres 131.2
2082 Female, age 91, right hemisphere 128.4
2527 Male, age 74, both hemispheres 100.4
Hippocampus, CA2
nTPM: 111.7
1892 Male, age 76, both hemispheres 140.3
2437 Female, age 94, left hemisphere 128.2
1963 Male, age 80, left hemisphere 116.5
1940 Female, age 85, left hemisphere 104.2
2113 Female, age 91, right hemisphere 101.8
2249 Male, age 74, both hemispheres 79.5
Hippocampus, CA3
nTPM: 136.6
2620 Female, age 94, left hemisphere 194.8
2861 Female, age 67, both hemispheres 188.3
2137 Male, age 80, left hemisphere 155.6
1867 Male, age 76, both hemispheres 115.9
1891 Female, age 85, both hemispheres 85.6
2436 Male, age 74, both hemispheres 79.3
Parahippocampal cortex
nTPM: 148.3
2622 Female, age 67, right hemisphere 187.5
2245 Female, age 91, both hemispheres 172.1
2693 Female, age 94, both hemispheres 171.2
1990 Female, age 91, right hemisphere 158.7
1850 Male, age 80, both hemispheres 157.2
2532 Female, age 72, left hemisphere 150.1
1933 Female, age 85, both hemispheres 135.1
2692 Male, age 74, both hemispheres 127.6
2250 Female, age 67, right hemisphere 120.9
2018 Male, age 76, both hemispheres 102.2
Perirhinal gyrus
nTPM: 183.6
2521 Female, age 94, right hemisphere 232.7
1847 Female, age 91, left hemisphere 216.8
1794 Male, age 80, right hemisphere 197.4
1841 Female, age 85, right hemisphere 146.6
2848 Male, age 76, right hemisphere 124.4
Subiculum
nTPM: 104.4
2438 Female, age 94, left hemisphere 127.4
1977 Female, age 85, both hemispheres 116.8
2619 Male, age 74, both hemispheres 108.7
2729 Female, age 91, right hemisphere 106.7
1901 Male, age 80, both hemispheres 102.3
2042 Male, age 76, both hemispheres 64.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.8
Samples: 197

Max nTPM: 81.9
Min nTPM: 0.6
Std nTPM: 19.1
Median nTPM: 25.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 81.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 81.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 81.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 80.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 78.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 73.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 71.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 65.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 64.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 64.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 62.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.1
FF:10153-102I9 76 years, female 46.6
FF:10169-103B7 60 years, female 41.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 83.0
Pig sample Sample description nTPM
Subiculum
nTPM: 42.6
Samples: 4

Max nTPM: 55.9
Min nTPM: 35.0
Sample A Female 55.9
Sample B Female 35.0
Sample C Male 38.0
Sample D Male 41.3
Dorsal hippocampus
nTPM: 83.1
Samples: 4

Max nTPM: 100.6
Min nTPM: 52.6
Sample A Female 89.3
Sample B Female 100.6
Sample C Male 52.6
Sample D Male 89.7
Entorhinal cortex
nTPM: 60.4
Samples: 4

Max nTPM: 67.9
Min nTPM: 46.0
Sample A Female 67.5
Sample B Female 46.0
Sample C Male 60.0
Sample D Male 67.9
Ventral hippocampus
nTPM: 58.1
Samples: 4

Max nTPM: 111.9
Min nTPM: 37.5
Sample A Female 37.5
Sample B Female 41.3
Sample C Male 41.5
Sample D Male 111.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 91.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 91.7
Samples: 4

Max nTPM: 100.4
Min nTPM: 84.7
Sample A Male 93.5
Sample B Male 88.3
Sample C Female 84.7
Sample D Female 100.4
Hippocampal formation
nTPM: 77.3
Samples: 4

Max nTPM: 84.8
Min nTPM: 65.2
Sample A Male 77.5
Sample B Male 81.6
Sample C Female 84.8
Sample D Female 65.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
1035 Antisense, RP_Baylor_103198, Mouse strain C57BL/6J (56 days, male) 5.7
1036 Antisense, RP_Baylor_103198, Mouse strain C57BL/6J (56 days, male) 4.5
1037 Sense, RPS_Baylor_37079, Mouse strain C57BL/6J (56 days, male) 0.0

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