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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
61.6
nTPM
Monaco:
84.4
nTPM
Schmiedel:
28.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.6
HPA sample
nTPM
gdT-cell nTPM: 61.6
Samples: 6
Max nTPM: 77.3
Min nTPM: 43.6
P10809_1007
43.6
P10809_1022
77.3
P10809_1041
70.7
P10809_1060
59.1
P10809_1077
59.4
P10809_1098
59.6
MAIT T-cell nTPM: 41.7
Samples: 6
Max nTPM: 58.8
Min nTPM: 32.5
P10809_1006
32.7
P10809_1024
42.3
P10809_1043
58.8
P10809_1062
48.5
P10809_1083
32.5
P10809_1097
35.6
Memory CD4 T-cell nTPM: 37.4
Samples: 6
Max nTPM: 42.9
Min nTPM: 29.9
P10809_1014
29.9
P10809_1026
37.6
P10809_1045
34.5
P10809_1064
42.9
P10809_1086
38.8
P10809_1113
40.7
Memory CD8 T-cell nTPM: 48.6
Samples: 5
Max nTPM: 64.3
Min nTPM: 36.2
P10809_1012
36.2
P10809_1027
49.6
P10809_1046
64.3
P10809_1065
50.5
P10809_1111
42.3
Naive CD4 T-cell nTPM: 29.5
Samples: 6
Max nTPM: 37.1
Min nTPM: 21.4
P10809_1015
21.4
P10809_1030
29.4
P10809_1049
37.1
P10809_1068
24.7
P10809_1085
33.2
P10809_1112
31.4
Naive CD8 T-cell nTPM: 47.6
Samples: 6
Max nTPM: 66.0
Min nTPM: 30.4
P10809_1016
30.4
P10809_1031
39.4
P10809_1050
53.0
P10809_1069
66.0
P10809_1087
45.3
P10809_1110
51.6
T-reg nTPM: 50.0
Samples: 6
Max nTPM: 89.9
Min nTPM: 27.4
P10809_1018
30.2
P10809_1037
39.7
P10809_1056
89.9
P10809_1075
27.4
P10809_1094
55.7
P10809_1106
57.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
84.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 65.2
Samples: 4
Max nTPM: 82.5
Min nTPM: 50.3
RHH5202_R3573
72.9
RHH5230_R3602
50.3
RHH5259_R3631
55.2
RHH5288_R3660
82.5
Effector memory CD8 T-cell nTPM: 62.1
Samples: 4
Max nTPM: 74.1
Min nTPM: 49.6
RHH5203_R3574
74.1
RHH5231_R3603
59.4
RHH5260_R3632
49.6
RHH5289_R3661
65.1
MAIT T-cell nTPM: 71.3
Samples: 4
Max nTPM: 81.9
Min nTPM: 51.0
RHH5233_R3605
79.0
RHH5205_R3576
73.3
RHH5262_R3634
51.0
RHH5297_R3663
81.9
Memory CD4 T-cell TFH nTPM: 77.0
Samples: 4
Max nTPM: 109.6
Min nTPM: 54.1
RHH5300_R3666
54.1
RHH5236_R3608
85.7
RHH5265_R3637
58.7
RHH5208_R3579
109.6
Memory CD4 T-cell Th1 nTPM: 62.7
Samples: 4
Max nTPM: 68.8
Min nTPM: 51.8
RHH5210_R3581
68.8
RHH5302_R3668
67.6
RHH5238_R3610
62.6
RHH5267_R3639
51.8
Memory CD4 T-cell Th1/Th17 nTPM: 64.5
Samples: 4
Max nTPM: 76.3
Min nTPM: 51.9
RHH5303_R3669
76.3
RHH5211_R3582
74.5
RHH5239_R3611
55.2
RHH5268_R3640
51.9
Memory CD4 T-cell Th17 nTPM: 61.9
Samples: 4
Max nTPM: 81.9
Min nTPM: 38.1
RHH5304_R3670
62.5
RHH5212_R3583
65.2
RHH5240_R3612
81.9
RHH5269_R3641
38.1
Memory CD4 T-cell Th2 nTPM: 59.9
Samples: 4
Max nTPM: 67.7
Min nTPM: 53.6
RHH5305_R3671
67.7
RHH5213_R3584
53.6
RHH5241_R3613
61.7
RHH5270_R3642
56.6
Naive CD4 T-cell nTPM: 61.0
Samples: 4
Max nTPM: 76.8
Min nTPM: 48.4
RHH5306_R3672
58.9
RHH5214_R3585
76.8
RHH5242_R3614
59.8
RHH5271_R3643
48.4
Naive CD8 T-cell nTPM: 65.7
Samples: 4
Max nTPM: 71.5
Min nTPM: 50.5
RHH5201_R3572
71.5
RHH5229_R3601
71.0
RHH5258_R3630
50.5
RHH5287_R3659
69.6
Non-Vd2 gdTCR nTPM: 70.2
Samples: 4
Max nTPM: 98.6
Min nTPM: 50.8
RHH5235_R3607
50.8
RHH5264_R3636
74.9
RHH5207_R3578
56.3
RHH5299_R3665
98.6
T-reg nTPM: 60.7
Samples: 4
Max nTPM: 67.2
Min nTPM: 55.1
RHH5301_R3667
62.9
RHH5237_R3609
57.4
RHH5266_R3638
55.1
RHH5209_R3580
67.2
Terminal effector memory CD4 T-cell nTPM: 56.8
Samples: 2
Max nTPM: 67.3
Min nTPM: 46.3
RHH5243_R3615
46.3
RHH5272_R3644
67.3
Terminal effector memory CD8 T-cell nTPM: 72.3
Samples: 4
Max nTPM: 79.0
Min nTPM: 60.2
RHH5232_R3604
60.2
RHH5204_R3575
79.0
RHH5261_R3633
78.8
RHH5296_R3662
71.3
Vd2 gdTCR nTPM: 84.4
Samples: 4
Max nTPM: 96.7
Min nTPM: 73.3
RHH5234_R3606
73.4
RHH5206_R3577
94.1
RHH5263_R3635
73.3
RHH5298_R3664
96.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
