HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:86.6 nTPM
HPA Brain:99.9 nTPM
GTEx:86.6 nTPM
FANTOM5:46.0 Scaled Tags Per Million
Pig:1.2 nTPM
Mouse:3.2 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030651
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 99.9
Sample id Sample description nTPM
Hippocampus
nTPM: 79.6
2529 Female, age 94, left hemisphere 104.9
1911 Female, age 85, right hemisphere 104.1
1898 Male, age 80, left hemisphere 83.8
2148 Female, age 91, left hemisphere 65.5
2621 Female, age 67, right hemisphere 61.5
1855 Male, age 76, left hemisphere 57.7
Dentate gyrus
nTPM: 84.0
2530 Female, age 94, left hemisphere 132.7
2528 Male, age 74, both hemispheres 110.6
2010 Male, age 76, both hemispheres 93.9
2531 Female, age 67, both hemispheres 59.3
2246 Female, age 85, both hemispheres 55.7
1927 Female, age 91, both hemispheres 52.1
Entorhinal gyrus
nTPM: 74.9
2117 Female, age 91, right hemisphere 139.8
2764 Male, age 80, right hemisphere 106.9
1938 Female, age 85, left hemisphere 55.4
2686 Male, age 75, right hemisphere 51.9
2613 Female, age 94, left hemisphere 48.1
1787 Male, age 76, left hemisphere 47.3
Hippocampus, CA1
nTPM: 59.5
1873 Female, age 85, both hemispheres 83.5
2527 Male, age 74, both hemispheres 71.7
2082 Female, age 91, right hemisphere 65.8
2749 Male, age 80, left hemisphere 50.3
2045 Male, age 76, both hemispheres 26.3
Hippocampus, CA2
nTPM: 77.3
1963 Male, age 80, left hemisphere 124.2
2249 Male, age 74, both hemispheres 89.6
2437 Female, age 94, left hemisphere 74.3
1940 Female, age 85, left hemisphere 71.3
2113 Female, age 91, right hemisphere 68.8
1892 Male, age 76, both hemispheres 35.6
Hippocampus, CA3
nTPM: 60.5
1891 Female, age 85, both hemispheres 96.5
2620 Female, age 94, left hemisphere 73.2
2436 Male, age 74, both hemispheres 55.9
1867 Male, age 76, both hemispheres 52.0
2861 Female, age 67, both hemispheres 50.4
2137 Male, age 80, left hemisphere 35.2
Parahippocampal cortex
nTPM: 49.9
2692 Male, age 74, both hemispheres 77.8
1990 Female, age 91, right hemisphere 70.6
2532 Female, age 72, left hemisphere 64.8
2018 Male, age 76, both hemispheres 50.5
2245 Female, age 91, both hemispheres 50.5
1933 Female, age 85, both hemispheres 49.6
1850 Male, age 80, both hemispheres 47.9
2693 Female, age 94, both hemispheres 33.5
2250 Female, age 67, right hemisphere 29.4
2622 Female, age 67, right hemisphere 24.9
Perirhinal gyrus
nTPM: 31.8
1794 Male, age 80, right hemisphere 40.2
2521 Female, age 94, right hemisphere 36.9
2848 Male, age 76, right hemisphere 29.0
1841 Female, age 85, right hemisphere 27.1
1847 Female, age 91, left hemisphere 25.8
Subiculum
nTPM: 99.9
2042 Male, age 76, both hemispheres 152.1
1901 Male, age 80, both hemispheres 128.6
1977 Female, age 85, both hemispheres 92.4
2619 Male, age 74, both hemispheres 84.0
2729 Female, age 91, right hemisphere 82.7
2438 Female, age 94, left hemisphere 59.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 86.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 86.6
Samples: 197

Max nTPM: 260.3
Min nTPM: 16.8
Std nTPM: 47.6
Median nTPM: 77.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 260.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 254.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 217.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 216.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 211.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 208.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 192.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 191.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 185.1
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 182.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 181.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.0
FF:10153-102I9 76 years, female 51.6
FF:10169-103B7 60 years, female 40.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.2
Pig sample Sample description nTPM
Subiculum
nTPM: 1.2
Samples: 4

Max nTPM: 2.2
Min nTPM: 0.3
Sample A Female 1.0
Sample B Female 0.3
Sample C Male 1.3
Sample D Male 2.2
Dorsal hippocampus
nTPM: 0.7
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.4
Sample A Female 0.8
Sample B Female 0.4
Sample C Male 1.1
Sample D Male 0.4
Entorhinal cortex
nTPM: 1.0
Samples: 4

Max nTPM: 1.8
Min nTPM: 0.3
Sample A Female 1.8
Sample B Female 1.0
Sample C Male 0.7
Sample D Male 0.3
Ventral hippocampus
nTPM: 0.8
Samples: 4

Max nTPM: 1.2
Min nTPM: 0.4
Sample A Female 0.7
Sample B Female 0.4
Sample C Male 1.2
Sample D Male 0.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.0
Samples: 4

Max nTPM: 2.5
Min nTPM: 1.4
Sample A Male 2.0
Sample B Male 2.0
Sample C Female 1.4
Sample D Female 2.5
Hippocampal formation
nTPM: 3.3
Samples: 4

Max nTPM: 6.3
Min nTPM: 0.7
Sample A Male 0.7
Sample B Male 2.2
Sample C Female 3.8
Sample D Female 6.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
79544848 Antisense, RP_071101_01_A09, Mouse strain C57BL/6J (56 days, male) 0.4

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