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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
33.5
nTPM
Monaco:
196.6
nTPM
Schmiedel:
143.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
33.5
HPA sample
nTPM
gdT-cell nTPM: 26.2
Samples: 6
Max nTPM: 28.6
Min nTPM: 22.1
P10809_1007
22.1
P10809_1022
27.2
P10809_1041
28.6
P10809_1060
25.3
P10809_1077
26.2
P10809_1098
27.5
MAIT T-cell nTPM: 18.7
Samples: 6
Max nTPM: 25.1
Min nTPM: 14.3
P10809_1006
15.0
P10809_1024
24.9
P10809_1043
25.1
P10809_1062
17.7
P10809_1083
14.3
P10809_1097
15.2
Memory CD4 T-cell nTPM: 17.8
Samples: 6
Max nTPM: 19.2
Min nTPM: 15.7
P10809_1014
19.0
P10809_1026
16.2
P10809_1045
19.2
P10809_1064
18.7
P10809_1086
18.2
P10809_1113
15.7
Memory CD8 T-cell nTPM: 20.8
Samples: 5
Max nTPM: 22.2
Min nTPM: 18.6
P10809_1012
18.6
P10809_1027
22.1
P10809_1046
19.8
P10809_1065
21.3
P10809_1111
22.2
Naive CD4 T-cell nTPM: 15.8
Samples: 6
Max nTPM: 17.3
Min nTPM: 12.5
P10809_1015
16.0
P10809_1030
12.5
P10809_1049
17.3
P10809_1068
16.6
P10809_1085
17.3
P10809_1112
15.0
Naive CD8 T-cell nTPM: 17.6
Samples: 6
Max nTPM: 24.1
Min nTPM: 12.7
P10809_1016
12.7
P10809_1031
17.8
P10809_1050
18.4
P10809_1069
17.0
P10809_1087
24.1
P10809_1110
15.6
T-reg nTPM: 33.5
Samples: 6
Max nTPM: 40.6
Min nTPM: 24.9
P10809_1018
40.6
P10809_1037
29.1
P10809_1056
39.4
P10809_1075
27.0
P10809_1094
40.0
P10809_1106
24.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
196.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 136.2
Samples: 4
Max nTPM: 147.8
Min nTPM: 120.8
RHH5202_R3573
135.9
RHH5230_R3602
147.8
RHH5259_R3631
120.8
RHH5288_R3660
140.2
Effector memory CD8 T-cell nTPM: 180.7
Samples: 4
Max nTPM: 204.0
Min nTPM: 161.0
RHH5203_R3574
170.1
RHH5231_R3603
204.0
RHH5260_R3632
187.6
RHH5289_R3661
161.0
MAIT T-cell nTPM: 112.0
Samples: 4
Max nTPM: 145.4
Min nTPM: 94.9
RHH5233_R3605
111.6
RHH5205_R3576
145.4
RHH5262_R3634
96.2
RHH5297_R3663
94.9
Memory CD4 T-cell TFH nTPM: 123.1
Samples: 4
Max nTPM: 131.7
Min nTPM: 100.2
RHH5300_R3666
131.7
RHH5236_R3608
129.8
RHH5265_R3637
100.2
RHH5208_R3579
130.8
Memory CD4 T-cell Th1 nTPM: 129.5
Samples: 4
Max nTPM: 148.4
Min nTPM: 98.2
RHH5210_R3581
98.2
RHH5302_R3668
135.2
RHH5238_R3610
148.4
RHH5267_R3639
136.1
Memory CD4 T-cell Th1/Th17 nTPM: 134.7
Samples: 4
Max nTPM: 159.3
Min nTPM: 101.1
RHH5303_R3669
159.3
RHH5211_R3582
141.8
RHH5239_R3611
136.7
RHH5268_R3640
101.1
Memory CD4 T-cell Th17 nTPM: 153.4
Samples: 4
Max nTPM: 172.4
Min nTPM: 130.0
RHH5304_R3670
172.4
RHH5212_R3583
130.0
RHH5240_R3612
167.0
RHH5269_R3641
144.1
Memory CD4 T-cell Th2 nTPM: 130.1
Samples: 4
Max nTPM: 143.9
Min nTPM: 115.9
RHH5305_R3671
143.6
RHH5213_R3584
143.9
RHH5241_R3613
117.1
RHH5270_R3642
115.9
Naive CD4 T-cell nTPM: 112.7
Samples: 4
Max nTPM: 121.0
Min nTPM: 106.2
RHH5306_R3672
121.0
RHH5214_R3585
107.3
RHH5242_R3614
116.4
RHH5271_R3643
106.2
Naive CD8 T-cell nTPM: 99.1
Samples: 4
Max nTPM: 129.4
Min nTPM: 76.0
RHH5201_R3572
97.3
RHH5229_R3601
129.4
RHH5258_R3630
76.0
RHH5287_R3659
93.6
Non-Vd2 gdTCR nTPM: 171.1
Samples: 4
Max nTPM: 199.2
Min nTPM: 155.9
RHH5235_R3607
163.3
RHH5264_R3636
166.1
RHH5207_R3578
199.2
RHH5299_R3665
155.9
T-reg nTPM: 153.0
Samples: 4
Max nTPM: 158.8
Min nTPM: 147.0
RHH5301_R3667
151.8
RHH5237_R3609
147.0
RHH5266_R3638
154.5
RHH5209_R3580
158.8
Terminal effector memory CD4 T-cell nTPM: 185.1
Samples: 2
Max nTPM: 205.4
Min nTPM: 164.8
RHH5243_R3615
205.4
RHH5272_R3644
164.8
Terminal effector memory CD8 T-cell nTPM: 196.6
Samples: 4
Max nTPM: 243.4
Min nTPM: 168.5
RHH5232_R3604
243.4
RHH5204_R3575
168.5
RHH5261_R3633
187.9
RHH5296_R3662
186.5
Vd2 gdTCR nTPM: 158.3
Samples: 4
Max nTPM: 183.6
Min nTPM: 137.9
RHH5234_R3606
156.4
RHH5206_R3577
155.3
RHH5263_R3635
183.6
RHH5298_R3664
137.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
