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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
83.3
nTPM
Monaco:
162.5
nTPM
Schmiedel:
117.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
83.3
HPA sample
nTPM
gdT-cell nTPM: 74.1
Samples: 6
Max nTPM: 110.5
Min nTPM: 55.2
P10809_1007
55.2
P10809_1022
88.6
P10809_1041
110.5
P10809_1060
66.1
P10809_1077
57.5
P10809_1098
66.5
MAIT T-cell nTPM: 83.3
Samples: 6
Max nTPM: 104.2
Min nTPM: 71.5
P10809_1006
79.4
P10809_1024
80.6
P10809_1043
104.2
P10809_1062
74.1
P10809_1083
71.5
P10809_1097
89.8
Memory CD4 T-cell nTPM: 79.4
Samples: 6
Max nTPM: 106.8
Min nTPM: 64.3
P10809_1014
65.2
P10809_1026
106.8
P10809_1045
80.4
P10809_1064
69.5
P10809_1086
64.3
P10809_1113
90.4
Memory CD8 T-cell nTPM: 79.1
Samples: 5
Max nTPM: 99.0
Min nTPM: 57.7
P10809_1012
76.8
P10809_1027
66.2
P10809_1046
95.9
P10809_1065
57.7
P10809_1111
99.0
Naive CD4 T-cell nTPM: 80.8
Samples: 6
Max nTPM: 98.5
Min nTPM: 57.9
P10809_1015
60.8
P10809_1030
98.5
P10809_1049
95.6
P10809_1068
78.4
P10809_1085
57.9
P10809_1112
93.8
Naive CD8 T-cell nTPM: 74.5
Samples: 6
Max nTPM: 89.4
Min nTPM: 56.9
P10809_1016
76.6
P10809_1031
59.1
P10809_1050
81.8
P10809_1069
83.0
P10809_1087
56.9
P10809_1110
89.4
T-reg nTPM: 80.7
Samples: 6
Max nTPM: 95.9
Min nTPM: 55.7
P10809_1018
63.9
P10809_1037
91.9
P10809_1056
55.7
P10809_1075
95.9
P10809_1094
89.3
P10809_1106
87.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
162.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 144.3
Samples: 4
Max nTPM: 183.8
Min nTPM: 80.7
RHH5202_R3573
183.8
RHH5230_R3602
181.7
RHH5259_R3631
80.7
RHH5288_R3660
131.0
Effector memory CD8 T-cell nTPM: 141.3
Samples: 4
Max nTPM: 174.4
Min nTPM: 90.3
RHH5203_R3574
174.4
RHH5231_R3603
153.1
RHH5260_R3632
90.3
RHH5289_R3661
147.5
MAIT T-cell nTPM: 162.5
Samples: 4
Max nTPM: 183.1
Min nTPM: 145.4
RHH5233_R3605
173.6
RHH5205_R3576
145.4
RHH5262_R3634
183.1
RHH5297_R3663
147.9
Memory CD4 T-cell TFH nTPM: 144.7
Samples: 4
Max nTPM: 191.3
Min nTPM: 124.8
RHH5300_R3666
127.4
RHH5236_R3608
191.3
RHH5265_R3637
124.8
RHH5208_R3579
135.2
Memory CD4 T-cell Th1 nTPM: 117.8
Samples: 4
Max nTPM: 164.0
Min nTPM: 82.0
RHH5210_R3581
164.0
RHH5302_R3668
130.0
RHH5238_R3610
82.0
RHH5267_R3639
95.2
Memory CD4 T-cell Th1/Th17 nTPM: 136.2
Samples: 4
Max nTPM: 202.1
Min nTPM: 76.7
RHH5303_R3669
154.5
RHH5211_R3582
202.1
RHH5239_R3611
76.7
RHH5268_R3640
111.6
Memory CD4 T-cell Th17 nTPM: 126.0
Samples: 4
Max nTPM: 148.4
Min nTPM: 102.3
RHH5304_R3670
135.6
RHH5212_R3583
148.4
RHH5240_R3612
117.7
RHH5269_R3641
102.3
Memory CD4 T-cell Th2 nTPM: 142.8
Samples: 4
Max nTPM: 167.4
Min nTPM: 127.6
RHH5305_R3671
127.6
RHH5213_R3584
167.4
RHH5241_R3613
144.2
RHH5270_R3642
132.1
Naive CD4 T-cell nTPM: 123.6
Samples: 4
Max nTPM: 160.2
Min nTPM: 105.4
RHH5306_R3672
118.4
RHH5214_R3585
160.2
RHH5242_R3614
110.3
RHH5271_R3643
105.4
Naive CD8 T-cell nTPM: 142.0
Samples: 4
Max nTPM: 182.3
Min nTPM: 84.6
RHH5201_R3572
182.3
RHH5229_R3601
84.6
RHH5258_R3630
133.8
RHH5287_R3659
167.3
Non-Vd2 gdTCR nTPM: 134.1
Samples: 4
Max nTPM: 147.6
Min nTPM: 113.1
RHH5235_R3607
113.1
RHH5264_R3636
131.8
RHH5207_R3578
143.7
RHH5299_R3665
147.6
T-reg nTPM: 124.0
Samples: 4
Max nTPM: 157.9
Min nTPM: 91.5
RHH5301_R3667
118.6
RHH5237_R3609
157.9
RHH5266_R3638
91.5
RHH5209_R3580
128.1
Terminal effector memory CD4 T-cell nTPM: 120.9
Samples: 2
Max nTPM: 126.2
Min nTPM: 115.6
RHH5243_R3615
126.2
RHH5272_R3644
115.6
Terminal effector memory CD8 T-cell nTPM: 145.6
Samples: 4
Max nTPM: 183.1
Min nTPM: 107.7
RHH5232_R3604
183.1
RHH5204_R3575
131.3
RHH5261_R3633
107.7
RHH5296_R3662
160.2
Vd2 gdTCR nTPM: 136.5
Samples: 4
Max nTPM: 159.5
Min nTPM: 109.8
RHH5234_R3606
159.5
RHH5206_R3577
123.3
RHH5263_R3635
109.8
RHH5298_R3664
153.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
