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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
29.2
nTPM
Monaco:
69.7
nTPM
Schmiedel:
36.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
29.2
HPA sample
nTPM
gdT-cell nTPM: 27.1
Samples: 6
Max nTPM: 36.8
Min nTPM: 20.0
P10809_1007
20.0
P10809_1022
36.8
P10809_1041
29.9
P10809_1060
23.4
P10809_1077
23.7
P10809_1098
28.6
MAIT T-cell nTPM: 26.1
Samples: 6
Max nTPM: 29.3
Min nTPM: 21.0
P10809_1006
26.9
P10809_1024
25.2
P10809_1043
24.8
P10809_1062
29.2
P10809_1083
21.0
P10809_1097
29.3
Memory CD4 T-cell nTPM: 23.4
Samples: 6
Max nTPM: 28.3
Min nTPM: 16.3
P10809_1014
16.3
P10809_1026
20.4
P10809_1045
21.9
P10809_1064
26.1
P10809_1086
28.3
P10809_1113
27.3
Memory CD8 T-cell nTPM: 27.0
Samples: 5
Max nTPM: 35.1
Min nTPM: 21.4
P10809_1012
21.8
P10809_1027
27.9
P10809_1046
21.4
P10809_1065
35.1
P10809_1111
28.7
Naive CD4 T-cell nTPM: 17.7
Samples: 6
Max nTPM: 22.0
Min nTPM: 14.8
P10809_1015
15.0
P10809_1030
14.8
P10809_1049
18.9
P10809_1068
14.9
P10809_1085
20.5
P10809_1112
22.0
Naive CD8 T-cell nTPM: 26.1
Samples: 6
Max nTPM: 36.7
Min nTPM: 14.8
P10809_1016
14.8
P10809_1031
36.7
P10809_1050
17.4
P10809_1069
33.8
P10809_1087
32.5
P10809_1110
21.1
T-reg nTPM: 29.2
Samples: 6
Max nTPM: 44.8
Min nTPM: 17.4
P10809_1018
17.4
P10809_1037
27.7
P10809_1056
18.6
P10809_1075
31.1
P10809_1094
35.7
P10809_1106
44.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
69.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 53.7
Samples: 4
Max nTPM: 63.0
Min nTPM: 45.7
RHH5202_R3573
49.0
RHH5230_R3602
45.7
RHH5259_R3631
63.0
RHH5288_R3660
57.1
Effector memory CD8 T-cell nTPM: 57.4
Samples: 4
Max nTPM: 65.7
Min nTPM: 51.7
RHH5203_R3574
58.5
RHH5231_R3603
53.6
RHH5260_R3632
51.7
RHH5289_R3661
65.7
MAIT T-cell nTPM: 55.7
Samples: 4
Max nTPM: 68.5
Min nTPM: 43.2
RHH5233_R3605
68.5
RHH5205_R3576
43.6
RHH5262_R3634
43.2
RHH5297_R3663
67.3
Memory CD4 T-cell TFH nTPM: 52.0
Samples: 4
Max nTPM: 55.3
Min nTPM: 47.6
RHH5300_R3666
47.6
RHH5236_R3608
54.1
RHH5265_R3637
50.9
RHH5208_R3579
55.3
Memory CD4 T-cell Th1 nTPM: 45.9
Samples: 4
Max nTPM: 56.2
Min nTPM: 39.5
RHH5210_R3581
45.0
RHH5302_R3668
42.9
RHH5238_R3610
39.5
RHH5267_R3639
56.2
Memory CD4 T-cell Th1/Th17 nTPM: 58.8
Samples: 4
Max nTPM: 65.4
Min nTPM: 46.0
RHH5303_R3669
63.3
RHH5211_R3582
65.4
RHH5239_R3611
60.5
RHH5268_R3640
46.0
Memory CD4 T-cell Th17 nTPM: 55.4
Samples: 4
Max nTPM: 72.4
Min nTPM: 38.2
RHH5304_R3670
38.2
RHH5212_R3583
42.6
RHH5240_R3612
72.4
RHH5269_R3641
68.3
Memory CD4 T-cell Th2 nTPM: 53.4
Samples: 4
Max nTPM: 62.1
Min nTPM: 43.1
RHH5305_R3671
43.1
RHH5213_R3584
62.0
RHH5241_R3613
62.1
RHH5270_R3642
46.3
Naive CD4 T-cell nTPM: 49.8
Samples: 4
Max nTPM: 74.2
Min nTPM: 34.8
RHH5306_R3672
36.5
RHH5214_R3585
34.8
RHH5242_R3614
74.2
RHH5271_R3643
53.7
Naive CD8 T-cell nTPM: 37.8
Samples: 4
Max nTPM: 53.1
Min nTPM: 21.4
RHH5201_R3572
53.1
RHH5229_R3601
24.4
RHH5258_R3630
52.3
RHH5287_R3659
21.4
Non-Vd2 gdTCR nTPM: 58.4
Samples: 4
Max nTPM: 68.5
Min nTPM: 50.2
RHH5235_R3607
50.2
RHH5264_R3636
68.5
RHH5207_R3578
58.7
RHH5299_R3665
56.3
T-reg nTPM: 51.9
Samples: 4
Max nTPM: 61.9
Min nTPM: 36.1
RHH5301_R3667
36.1
RHH5237_R3609
61.9
RHH5266_R3638
59.6
RHH5209_R3580
50.0
Terminal effector memory CD4 T-cell nTPM: 69.7
Samples: 2
Max nTPM: 82.1
Min nTPM: 57.2
RHH5243_R3615
82.1
RHH5272_R3644
57.2
Terminal effector memory CD8 T-cell nTPM: 60.4
Samples: 4
Max nTPM: 77.1
Min nTPM: 49.5
RHH5232_R3604
61.4
RHH5204_R3575
49.5
RHH5261_R3633
77.1
RHH5296_R3662
53.4
Vd2 gdTCR nTPM: 61.5
Samples: 4
Max nTPM: 70.7
Min nTPM: 52.4
RHH5234_R3606
70.7
RHH5206_R3577
54.0
RHH5263_R3635
69.0
RHH5298_R3664
52.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
