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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
51.5
nTPM
Monaco:
294.8
nTPM
Schmiedel:
603.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.5
HPA sample
nTPM
gdT-cell nTPM: 27.8
Samples: 6
Max nTPM: 69.4
Min nTPM: 13.5
P10809_1007
69.4
P10809_1022
21.6
P10809_1041
23.5
P10809_1060
13.5
P10809_1077
17.2
P10809_1098
21.4
MAIT T-cell nTPM: 24.7
Samples: 6
Max nTPM: 42.6
Min nTPM: 12.9
P10809_1006
42.6
P10809_1024
12.9
P10809_1043
15.8
P10809_1062
16.1
P10809_1083
21.5
P10809_1097
39.4
Memory CD4 T-cell nTPM: 51.5
Samples: 6
Max nTPM: 107.2
Min nTPM: 24.8
P10809_1014
107.2
P10809_1026
34.2
P10809_1045
68.4
P10809_1064
43.9
P10809_1086
30.5
P10809_1113
24.8
Memory CD8 T-cell nTPM: 48.4
Samples: 5
Max nTPM: 96.3
Min nTPM: 22.7
P10809_1012
96.3
P10809_1027
22.7
P10809_1046
68.0
P10809_1065
29.1
P10809_1111
25.7
Naive CD4 T-cell nTPM: 34.5
Samples: 6
Max nTPM: 52.0
Min nTPM: 21.0
P10809_1015
52.0
P10809_1030
35.0
P10809_1049
36.9
P10809_1068
34.2
P10809_1085
27.9
P10809_1112
21.0
Naive CD8 T-cell nTPM: 25.3
Samples: 6
Max nTPM: 29.4
Min nTPM: 16.0
P10809_1016
29.1
P10809_1031
25.7
P10809_1050
25.1
P10809_1069
29.4
P10809_1087
16.0
P10809_1110
26.2
T-reg nTPM: 25.5
Samples: 6
Max nTPM: 35.2
Min nTPM: 15.7
P10809_1018
23.8
P10809_1037
21.9
P10809_1056
35.2
P10809_1075
26.5
P10809_1094
15.7
P10809_1106
30.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
294.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 243.6
Samples: 4
Max nTPM: 559.4
Min nTPM: 48.4
RHH5202_R3573
48.4
RHH5230_R3602
559.4
RHH5259_R3631
280.0
RHH5288_R3660
86.6
Effector memory CD8 T-cell nTPM: 248.0
Samples: 4
Max nTPM: 431.3
Min nTPM: 93.7
RHH5203_R3574
105.3
RHH5231_R3603
361.8
RHH5260_R3632
431.3
RHH5289_R3661
93.7
MAIT T-cell nTPM: 126.2
Samples: 4
Max nTPM: 248.2
Min nTPM: 75.8
RHH5233_R3605
84.2
RHH5205_R3576
96.4
RHH5262_R3634
248.2
RHH5297_R3663
75.8
Memory CD4 T-cell TFH nTPM: 236.9
Samples: 4
Max nTPM: 542.3
Min nTPM: 66.3
RHH5300_R3666
218.3
RHH5236_R3608
542.3
RHH5265_R3637
120.7
RHH5208_R3579
66.3
Memory CD4 T-cell Th1 nTPM: 294.8
Samples: 4
Max nTPM: 481.3
Min nTPM: 107.2
RHH5210_R3581
107.2
RHH5302_R3668
140.7
RHH5238_R3610
481.3
RHH5267_R3639
449.9
Memory CD4 T-cell Th1/Th17 nTPM: 292.0
Samples: 4
Max nTPM: 477.0
Min nTPM: 88.0
RHH5303_R3669
88.0
RHH5211_R3582
258.3
RHH5239_R3611
344.5
RHH5268_R3640
477.0
Memory CD4 T-cell Th17 nTPM: 276.1
Samples: 4
Max nTPM: 491.9
Min nTPM: 88.5
RHH5304_R3670
95.7
RHH5212_R3583
428.3
RHH5240_R3612
88.5
RHH5269_R3641
491.9
Memory CD4 T-cell Th2 nTPM: 226.7
Samples: 4
Max nTPM: 466.9
Min nTPM: 79.4
RHH5305_R3671
145.1
RHH5213_R3584
215.5
RHH5241_R3613
79.4
RHH5270_R3642
466.9
Naive CD4 T-cell nTPM: 261.5
Samples: 4
Max nTPM: 370.9
Min nTPM: 156.7
RHH5306_R3672
272.9
RHH5214_R3585
370.9
RHH5242_R3614
156.7
RHH5271_R3643
245.4
Naive CD8 T-cell nTPM: 202.2
Samples: 4
Max nTPM: 433.0
Min nTPM: 58.1
RHH5201_R3572
58.1
RHH5229_R3601
433.0
RHH5258_R3630
161.1
RHH5287_R3659
156.6
Non-Vd2 gdTCR nTPM: 70.1
Samples: 4
Max nTPM: 155.5
Min nTPM: 21.3
RHH5235_R3607
155.5
RHH5264_R3636
21.8
RHH5207_R3578
21.3
RHH5299_R3665
81.9
T-reg nTPM: 185.0
Samples: 4
Max nTPM: 298.3
Min nTPM: 117.0
RHH5301_R3667
117.0
RHH5237_R3609
298.3
RHH5266_R3638
199.4
RHH5209_R3580
125.3
Terminal effector memory CD4 T-cell nTPM: 292.4
Samples: 2
Max nTPM: 513.5
Min nTPM: 71.3
RHH5243_R3615
513.5
RHH5272_R3644
71.3
Terminal effector memory CD8 T-cell nTPM: 111.6
Samples: 4
Max nTPM: 174.5
Min nTPM: 61.5
RHH5232_R3604
117.8
RHH5204_R3575
61.5
RHH5261_R3633
174.5
RHH5296_R3662
92.5
Vd2 gdTCR nTPM: 141.5
Samples: 4
Max nTPM: 191.5
Min nTPM: 79.4
RHH5234_R3606
163.4
RHH5206_R3577
79.4
RHH5263_R3635
191.5
RHH5298_R3664
131.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
