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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
41.2
nTPM
Monaco:
44.1
nTPM
Schmiedel:
101.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
41.2
HPA sample
nTPM
gdT-cell nTPM: 6.4
Samples: 6
Max nTPM: 15.8
Min nTPM: 0.9
P10809_1007
0.9
P10809_1022
15.8
P10809_1041
13.5
P10809_1060
4.5
P10809_1077
1.7
P10809_1098
1.9
MAIT T-cell nTPM: 10.2
Samples: 6
Max nTPM: 18.8
Min nTPM: 1.4
P10809_1006
7.9
P10809_1024
11.8
P10809_1043
18.8
P10809_1062
1.4
P10809_1083
10.2
P10809_1097
11.1
Memory CD4 T-cell nTPM: 16.0
Samples: 6
Max nTPM: 30.3
Min nTPM: 3.2
P10809_1014
3.2
P10809_1026
22.4
P10809_1045
30.3
P10809_1064
8.9
P10809_1086
6.3
P10809_1113
24.8
Memory CD8 T-cell nTPM: 10.1
Samples: 5
Max nTPM: 17.7
Min nTPM: 1.0
P10809_1012
15.6
P10809_1027
10.1
P10809_1046
17.7
P10809_1065
1.0
P10809_1111
6.3
Naive CD4 T-cell nTPM: 26.9
Samples: 6
Max nTPM: 49.7
Min nTPM: 13.8
P10809_1015
14.9
P10809_1030
32.6
P10809_1049
49.7
P10809_1068
27.8
P10809_1085
13.8
P10809_1112
22.7
Naive CD8 T-cell nTPM: 12.4
Samples: 6
Max nTPM: 26.2
Min nTPM: 0.9
P10809_1016
8.7
P10809_1031
26.2
P10809_1050
21.1
P10809_1069
2.9
P10809_1087
0.9
P10809_1110
14.8
T-reg nTPM: 41.2
Samples: 6
Max nTPM: 53.6
Min nTPM: 21.0
P10809_1018
37.3
P10809_1037
48.7
P10809_1056
53.6
P10809_1075
51.4
P10809_1094
35.3
P10809_1106
21.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.2
Samples: 4
Max nTPM: 25.3
Min nTPM: 4.0
RHH5202_R3573
10.7
RHH5230_R3602
4.0
RHH5259_R3631
4.6
RHH5288_R3660
25.3
Effector memory CD8 T-cell nTPM: 17.0
Samples: 4
Max nTPM: 35.2
Min nTPM: 6.7
RHH5203_R3574
9.5
RHH5231_R3603
16.6
RHH5260_R3632
6.7
RHH5289_R3661
35.2
MAIT T-cell nTPM: 14.2
Samples: 4
Max nTPM: 19.6
Min nTPM: 5.1
RHH5233_R3605
5.1
RHH5205_R3576
19.6
RHH5262_R3634
13.7
RHH5297_R3663
18.3
Memory CD4 T-cell TFH nTPM: 32.5
Samples: 4
Max nTPM: 58.9
Min nTPM: 11.5
RHH5300_R3666
58.9
RHH5236_R3608
23.7
RHH5265_R3637
35.9
RHH5208_R3579
11.5
Memory CD4 T-cell Th1 nTPM: 36.8
Samples: 4
Max nTPM: 61.5
Min nTPM: 23.8
RHH5210_R3581
24.3
RHH5302_R3668
37.7
RHH5238_R3610
61.5
RHH5267_R3639
23.8
Memory CD4 T-cell Th1/Th17 nTPM: 6.4
Samples: 4
Max nTPM: 16.6
Min nTPM: 1.0
RHH5303_R3669
16.6
RHH5211_R3582
2.4
RHH5239_R3611
5.4
RHH5268_R3640
1.0
Memory CD4 T-cell Th17 nTPM: 38.1
Samples: 4
Max nTPM: 84.9
Min nTPM: 11.7
RHH5304_R3670
20.4
RHH5212_R3583
35.2
RHH5240_R3612
84.9
RHH5269_R3641
11.7
Memory CD4 T-cell Th2 nTPM: 15.7
Samples: 4
Max nTPM: 21.8
Min nTPM: 11.2
RHH5305_R3671
21.8
RHH5213_R3584
12.0
RHH5241_R3613
11.2
RHH5270_R3642
17.8
Naive CD4 T-cell nTPM: 25.9
Samples: 4
Max nTPM: 58.8
Min nTPM: 2.4
RHH5306_R3672
58.8
RHH5214_R3585
2.4
RHH5242_R3614
7.6
RHH5271_R3643
34.9
Naive CD8 T-cell nTPM: 9.8
Samples: 4
Max nTPM: 16.0
Min nTPM: 0.6
RHH5201_R3572
0.6
RHH5229_R3601
6.5
RHH5258_R3630
15.9
RHH5287_R3659
16.0
Non-Vd2 gdTCR nTPM: 12.3
Samples: 4
Max nTPM: 22.0
Min nTPM: 3.7
RHH5235_R3607
22.0
RHH5264_R3636
6.9
RHH5207_R3578
3.7
RHH5299_R3665
16.4
T-reg nTPM: 44.1
Samples: 4
Max nTPM: 65.7
Min nTPM: 26.1
RHH5301_R3667
50.2
RHH5237_R3609
65.7
RHH5266_R3638
26.1
RHH5209_R3580
34.4
Terminal effector memory CD4 T-cell nTPM: 9.7
Samples: 2
Max nTPM: 15.9
Min nTPM: 3.5
RHH5243_R3615
15.9
RHH5272_R3644
3.5
Terminal effector memory CD8 T-cell nTPM: 11.4
Samples: 4
Max nTPM: 29.8
Min nTPM: 0.6
RHH5232_R3604
29.8
RHH5204_R3575
5.5
RHH5261_R3633
0.6
RHH5296_R3662
9.6
Vd2 gdTCR nTPM: 16.8
Samples: 4
Max nTPM: 29.5
Min nTPM: 3.7
RHH5234_R3606
3.7
RHH5206_R3577
18.3
RHH5263_R3635
29.5
RHH5298_R3664
15.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
