HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:7.6 nTPM
HPA Brain:23.4 nTPM
GTEx:7.6 nTPM
FANTOM5:116.1 Scaled Tags Per Million
Pig:25.0 nTPM
Mouse:50.4 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019136Antibody HPA019528Antibody HPA019529
Glial cells HighMediumNot detected
Neuronal cells HighHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.4
Sample id Sample description nTPM
Hippocampus
nTPM: 21.9
2621 Female, age 67, right hemisphere 24.5
2148 Female, age 91, left hemisphere 23.2
1898 Male, age 80, left hemisphere 22.3
1855 Male, age 76, left hemisphere 21.9
2529 Female, age 94, left hemisphere 20.5
1911 Female, age 85, right hemisphere 19.1
Dentate gyrus
nTPM: 22.0
1927 Female, age 91, both hemispheres 24.7
2531 Female, age 67, both hemispheres 23.5
2530 Female, age 94, left hemisphere 22.4
2528 Male, age 74, both hemispheres 21.2
2246 Female, age 85, both hemispheres 20.6
2010 Male, age 76, both hemispheres 19.7
Entorhinal gyrus
nTPM: 23.4
2613 Female, age 94, left hemisphere 26.5
2764 Male, age 80, right hemisphere 25.1
2686 Male, age 75, right hemisphere 23.8
1938 Female, age 85, left hemisphere 23.1
1787 Male, age 76, left hemisphere 22.4
2117 Female, age 91, right hemisphere 19.2
Hippocampus, CA1
nTPM: 22.6
2749 Male, age 80, left hemisphere 31.5
1873 Female, age 85, both hemispheres 21.5
2527 Male, age 74, both hemispheres 21.0
2082 Female, age 91, right hemisphere 20.2
2045 Male, age 76, both hemispheres 18.7
Hippocampus, CA2
nTPM: 21.9
1963 Male, age 80, left hemisphere 27.4
1892 Male, age 76, both hemispheres 25.4
2437 Female, age 94, left hemisphere 21.9
2113 Female, age 91, right hemisphere 20.5
2249 Male, age 74, both hemispheres 18.1
1940 Female, age 85, left hemisphere 17.8
Hippocampus, CA3
nTPM: 22.9
2137 Male, age 80, left hemisphere 28.4
2861 Female, age 67, both hemispheres 26.8
2620 Female, age 94, left hemisphere 26.5
1867 Male, age 76, both hemispheres 19.1
1891 Female, age 85, both hemispheres 18.8
2436 Male, age 74, both hemispheres 17.9
Parahippocampal cortex
nTPM: 22.2
2622 Female, age 67, right hemisphere 25.9
1850 Male, age 80, both hemispheres 24.2
2532 Female, age 72, left hemisphere 23.6
2245 Female, age 91, both hemispheres 22.6
2692 Male, age 74, both hemispheres 22.4
1990 Female, age 91, right hemisphere 21.8
2693 Female, age 94, both hemispheres 21.8
1933 Female, age 85, both hemispheres 20.2
2250 Female, age 67, right hemisphere 20.1
2018 Male, age 76, both hemispheres 19.1
Perirhinal gyrus
nTPM: 23.3
1794 Male, age 80, right hemisphere 25.0
1847 Female, age 91, left hemisphere 24.0
2848 Male, age 76, right hemisphere 23.2
1841 Female, age 85, right hemisphere 22.6
2521 Female, age 94, right hemisphere 21.9
Subiculum
nTPM: 20.5
2619 Male, age 74, both hemispheres 21.9
1901 Male, age 80, both hemispheres 21.8
1977 Female, age 85, both hemispheres 21.1
2438 Female, age 94, left hemisphere 21.1
2729 Female, age 91, right hemisphere 19.2
2042 Male, age 76, both hemispheres 18.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.6
Samples: 197

Max nTPM: 17.5
Min nTPM: 2.4
Std nTPM: 2.2
Median nTPM: 7.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 17.5
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 15.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 12.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 12.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 12.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 12.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 12.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 11.8
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 11.7
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 11.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 11.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 116.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 116.1
FF:10169-103B7 60 years, female 143.3
FF:10153-102I9 76 years, female 88.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.0
Pig sample Sample description nTPM
Subiculum
nTPM: 21.4
Samples: 4

Max nTPM: 28.3
Min nTPM: 17.6
Sample A Female 28.3
Sample B Female 19.3
Sample C Male 20.4
Sample D Male 17.6
Dorsal hippocampus
nTPM: 23.4
Samples: 4

Max nTPM: 30.0
Min nTPM: 19.3
Sample A Female 30.0
Sample B Female 24.9
Sample C Male 19.3
Sample D Male 19.4
Entorhinal cortex
nTPM: 25.0
Samples: 4

Max nTPM: 26.5
Min nTPM: 22.6
Sample A Female 25.3
Sample B Female 25.5
Sample C Male 26.5
Sample D Male 22.6
Ventral hippocampus
nTPM: 23.8
Samples: 4

Max nTPM: 30.2
Min nTPM: 16.9
Sample A Female 23.9
Sample B Female 16.9
Sample C Male 30.2
Sample D Male 24.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 50.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.4
Samples: 4

Max nTPM: 60.1
Min nTPM: 43.4
Sample A Male 48.5
Sample B Male 49.6
Sample C Female 43.4
Sample D Female 60.1
Hippocampal formation
nTPM: 45.9
Samples: 4

Max nTPM: 49.4
Min nTPM: 43.4
Sample A Male 43.4
Sample B Male 45.2
Sample C Female 49.4
Sample D Female 45.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
69529005 Antisense, RP_050421_03_C07, Mouse strain C57BL/6J (56 days, male) 5.3

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