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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
22.4
nTPM
Monaco:
91.1
nTPM
Schmiedel:
56.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
22.4
HPA sample
nTPM
gdT-cell nTPM: 19.1
Samples: 6
Max nTPM: 35.9
Min nTPM: 8.4
P10809_1007
26.3
P10809_1022
14.4
P10809_1041
35.9
P10809_1060
8.4
P10809_1077
11.7
P10809_1098
17.9
MAIT T-cell nTPM: 18.3
Samples: 6
Max nTPM: 38.1
Min nTPM: 6.6
P10809_1006
21.9
P10809_1024
7.0
P10809_1043
16.5
P10809_1062
6.6
P10809_1083
19.7
P10809_1097
38.1
Memory CD4 T-cell nTPM: 22.3
Samples: 6
Max nTPM: 40.0
Min nTPM: 6.8
P10809_1014
29.5
P10809_1026
22.4
P10809_1045
40.0
P10809_1064
18.8
P10809_1086
16.2
P10809_1113
6.8
Memory CD8 T-cell nTPM: 20.0
Samples: 5
Max nTPM: 31.2
Min nTPM: 11.5
P10809_1012
25.3
P10809_1027
11.5
P10809_1046
31.2
P10809_1065
17.1
P10809_1111
14.9
Naive CD4 T-cell nTPM: 22.4
Samples: 6
Max nTPM: 41.7
Min nTPM: 9.7
P10809_1015
28.1
P10809_1030
17.1
P10809_1049
41.7
P10809_1068
11.7
P10809_1085
25.9
P10809_1112
9.7
Naive CD8 T-cell nTPM: 15.7
Samples: 6
Max nTPM: 19.2
Min nTPM: 12.6
P10809_1016
12.6
P10809_1031
16.4
P10809_1050
17.0
P10809_1069
15.8
P10809_1087
13.0
P10809_1110
19.2
T-reg nTPM: 16.9
Samples: 6
Max nTPM: 33.2
Min nTPM: 9.3
P10809_1018
9.3
P10809_1037
20.6
P10809_1056
33.2
P10809_1075
12.2
P10809_1094
9.5
P10809_1106
16.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
91.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 69.2
Samples: 4
Max nTPM: 93.8
Min nTPM: 39.3
RHH5202_R3573
39.3
RHH5230_R3602
91.2
RHH5259_R3631
93.8
RHH5288_R3660
52.4
Effector memory CD8 T-cell nTPM: 75.2
Samples: 4
Max nTPM: 123.5
Min nTPM: 40.9
RHH5203_R3574
40.9
RHH5231_R3603
74.7
RHH5260_R3632
123.5
RHH5289_R3661
61.6
MAIT T-cell nTPM: 70.4
Samples: 4
Max nTPM: 95.2
Min nTPM: 57.0
RHH5233_R3605
61.6
RHH5205_R3576
67.7
RHH5262_R3634
95.2
RHH5297_R3663
57.0
Memory CD4 T-cell TFH nTPM: 72.8
Samples: 4
Max nTPM: 97.4
Min nTPM: 62.9
RHH5300_R3666
67.5
RHH5236_R3608
97.4
RHH5265_R3637
62.9
RHH5208_R3579
63.3
Memory CD4 T-cell Th1 nTPM: 63.4
Samples: 4
Max nTPM: 102.2
Min nTPM: 38.3
RHH5210_R3581
38.3
RHH5302_R3668
38.8
RHH5238_R3610
74.2
RHH5267_R3639
102.2
Memory CD4 T-cell Th1/Th17 nTPM: 71.2
Samples: 4
Max nTPM: 116.8
Min nTPM: 54.0
RHH5303_R3669
55.7
RHH5211_R3582
58.3
RHH5239_R3611
54.0
RHH5268_R3640
116.8
Memory CD4 T-cell Th17 nTPM: 74.9
Samples: 4
Max nTPM: 116.7
Min nTPM: 55.3
RHH5304_R3670
58.5
RHH5212_R3583
68.9
RHH5240_R3612
55.3
RHH5269_R3641
116.7
Memory CD4 T-cell Th2 nTPM: 86.1
Samples: 4
Max nTPM: 132.9
Min nTPM: 46.8
RHH5305_R3671
77.7
RHH5213_R3584
87.0
RHH5241_R3613
46.8
RHH5270_R3642
132.9
Naive CD4 T-cell nTPM: 84.6
Samples: 4
Max nTPM: 95.9
Min nTPM: 69.5
RHH5306_R3672
83.2
RHH5214_R3585
89.8
RHH5242_R3614
69.5
RHH5271_R3643
95.9
Naive CD8 T-cell nTPM: 57.5
Samples: 4
Max nTPM: 80.8
Min nTPM: 30.7
RHH5201_R3572
30.7
RHH5229_R3601
58.4
RHH5258_R3630
60.2
RHH5287_R3659
80.8
Non-Vd2 gdTCR nTPM: 76.2
Samples: 4
Max nTPM: 106.6
Min nTPM: 54.7
RHH5235_R3607
106.6
RHH5264_R3636
54.7
RHH5207_R3578
72.9
RHH5299_R3665
70.5
T-reg nTPM: 66.0
Samples: 4
Max nTPM: 88.4
Min nTPM: 51.6
RHH5301_R3667
51.6
RHH5237_R3609
88.4
RHH5266_R3638
64.5
RHH5209_R3580
59.6
Terminal effector memory CD4 T-cell nTPM: 91.1
Samples: 2
Max nTPM: 114.0
Min nTPM: 68.2
RHH5243_R3615
114.0
RHH5272_R3644
68.2
Terminal effector memory CD8 T-cell nTPM: 85.6
Samples: 4
Max nTPM: 153.8
Min nTPM: 54.8
RHH5232_R3604
75.0
RHH5204_R3575
54.8
RHH5261_R3633
153.8
RHH5296_R3662
58.6
Vd2 gdTCR nTPM: 64.0
Samples: 4
Max nTPM: 79.5
Min nTPM: 52.2
RHH5234_R3606
59.1
RHH5206_R3577
65.2
RHH5263_R3635
79.5
RHH5298_R3664
52.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
