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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
190.7
nTPM
FANTOM5:
565.7
Scaled Tags Per Million
Pig:
153.6
nTPM
Allen mouse:
11.8
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
190.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 148.2
2188
Female, age 91, both hemispheres
176.2
2301
Female, age 85, both hemispheres
160.0
2090
Male, age 80, both hemispheres
136.2
1984
Male, age 76, both hemispheres
120.3
Dorsal cochlear nucleus nTPM: 127.9
2187
Female, age 91, both hemispheres
153.2
2802
Male, age 74, right hemisphere
130.1
2058
Male, age 76, both hemispheres
128.3
2378
Male, age 80, both hemispheres
116.3
2370
Male, age 61, both hemispheres
111.6
Dorsal tegmental nucleus nTPM: 131.4
2326
Male, age 74, both hemispheres
146.2
2083
Male, age 80, both hemispheres
139.9
1936
Male, age 76, left hemisphere
126.3
2358
Male, age 61, both hemispheres
113.3
Dorsolateral tegmental area nTPM: 141.5
2751
Female, age 85, both hemispheres
168.2
2654
Male, age 80, both hemispheres
147.5
2360
Male, age 74, both hemispheres
134.2
2337
Male, age 61, both hemispheres
133.9
2141
Male, age 76, both hemispheres
123.6
Kolliker-Fuse nucleus nTPM: 151.5
2793
Female, age 91, left hemisphere
165.6
2163
Male, age 80, both hemispheres
148.8
2315
Male, age 76, right hemisphere
140.2
Lateral lemniscal nuclei nTPM: 173.6
2036
Male, age 80, both hemispheres
188.4
2169
Male, age 76, both hemispheres
182.9
2746
Female, age 85, left hemisphere
180.5
2320
Female, age 91, left hemisphere
159.6
2453
Male, age 74, right hemisphere
156.7
Lateral parabrachial nucleus nTPM: 152.2
2139
Female, age 85, right hemisphere
160.5
2792
Male, age 76, both hemispheres
159.3
2013
Male, age 80, both hemispheres
153.4
2790
Male, age 61, both hemispheres
135.5
Lateral vestibular nucleus nTPM: 140.2
2184
Male, age 76, both hemispheres
148.1
2311
Male, age 80, both hemispheres
132.3
Locus coeruleus nTPM: 161.8
2014
Male, age 55, unknown
205.9
2788
Male, age 74, unknown
186.6
2123
Female, age 91, both hemispheres
157.4
2317
Female, age 72, unknown
153.7
1980
Male, age 76, both hemispheres
149.3
2720
Male, age 74, both hemispheres
139.9
2162
Male, age 80, both hemispheres
139.8
Medial parabrachial nucleus nTPM: 145.2
2170
Female, age 91, both hemispheres
169.9
2854
Male, age 80, both hemispheres
154.1
2463
Female, age 85, right hemisphere
139.9
2786
Male, age 76, both hemispheres
133.2
2156
Male, age 61, both hemispheres
129.1
Medial periolivary nuclei nTPM: 174.8
2063
Male, age 76, both hemispheres
202.1
2171
Female, age 85, both hemispheres
198.4
2791
Male, age 74, right hemisphere
177.5
2081
Male, age 80, both hemispheres
154.5
2458
Female, age 91, both hemispheres
141.3
Motor facial nucleus nTPM: 161.8
2062
Male, age 76, both hemispheres
195.2
2365
Male, age 74, right hemisphere
175.8
2697
Female, age 85, both hemispheres
163.1
2327
Male, age 80, both hemispheres
154.3
2126
Male, age 61, both hemispheres
149.2
2795
Female, age 91, both hemispheres
133.2
Motor trigeminal nucleus nTPM: 144.8
2079
Male, age 80, both hemispheres
165.4
2560
Male, age 74, both hemispheres
156.7
2309
Male, age 76, both hemispheres
143.2
2321
Female, age 91, both hemispheres
138.8
2335
Male, age 61, both hemispheres
119.6
Nuclei of the trapezoid body nTPM: 180.9
2159
Male, age 61, both hemispheres
210.5
2735
Female, age 85, both hemispheres
197.6
1983
Male, age 76, both hemispheres
195.3
2166
Male, age 80, both hemispheres
154.5
2368
Female, age 91, both hemispheres
146.6
Nucleus raphe magnus nTPM: 181.0
2160
Male, age 61, both hemispheres
231.7
2172
Female, age 85, both hemispheres
186.3
2455
Male, age 74, both hemispheres
182.3
2051
Male, age 76, both hemispheres
169.0
2328
Male, age 80, both hemispheres
158.6
2459
Female, age 91, both hemispheres
157.8
Paramedian reticular nucleus nTPM: 166.7
2050
Female, age 85, both hemispheres
182.8
2052
Male, age 76, both hemispheres
167.6
2057
Male, age 80, both hemispheres
161.9
2313
Male, age 61, both hemispheres
154.6
Pedunculopontine tegmental nucleus nTPM: 143.3
2334
Male, age 80, both hemispheres
146.4
2338
Male, age 61, both hemispheres
143.9
1921
Female, age 85, both hemispheres
139.5
Pontine nuclei nTPM: 190.7
2727
Male, age 61, right hemisphere
245.7
1863
Male, age 55, unknown
206.7
2454
Male, age 74, left hemisphere
198.7
2109
Female, age 72, unknown
193.7
1968
Male, age 76, left hemisphere
190.0
2787
Female, age 85, both hemispheres
178.2
2319
Female, age 91, both hemispheres
175.5
2115
Male, age 80, left hemisphere
136.8
Pontine raphe nucleus nTPM: 166.4
2122
Female, age 85, midline
186.0
2853
Male, age 76, midline
146.8
Posteroventral cochlear nucleus nTPM: 152.1
2135
Female, age 91, both hemispheres
177.8
2341
Male, age 80, both hemispheres
162.7
2752
Female, age 85, both hemispheres
156.2
2070
Male, age 76, both hemispheres
145.1
2371
Male, age 61, both hemispheres
118.7
Principal sensory trigeminal nucleus nTPM: 170.9
2158
Male, age 61, both hemispheres
193.6
2008
Male, age 80, left hemisphere
178.6
2367
Female, age 91, left hemisphere
173.5
2324
Male, age 76, both hemispheres
137.8
Reticular pontine nucleus, caudal nTPM: 166.2
2092
Male, age 76, both hemispheres
175.2
2457
Female, age 91, both hemispheres
169.0
2559
Male, age 74, both hemispheres
162.8
2332
Male, age 80, right hemisphere
157.7
Reticular pontine nucleus, oral nTPM: 167.1
2361
Male, age 74, both hemispheres
183.5
2012
Female, age 85, both hemispheres
180.6
2366
Female, age 91, both hemispheres
173.6
1939
Male, age 80, both hemispheres
155.4
2167
Male, age 76, both hemispheres
142.3
Reticulotegmental nucleus nTPM: 144.6
2325
Male, age 76, both hemispheres
153.8
2452
Male, age 74, both hemispheres
145.4
2322
Female, age 91, both hemispheres
145.0
2333
Male, age 80, both hemispheres
134.1
Spinal trigeminal nucleus, oral nTPM: 138.8
2737
Female, age 85, both hemispheres
144.5
2164
Male, age 80, both hemispheres
140.1
1978
Male, age 76, both hemispheres
131.7
Subcoeruleus area nTPM: 151.9
1958
Male, age 80, both hemispheres
171.9
2369
Female, age 85, left hemisphere
166.4
2089
Male, age 76, left hemisphere
155.6
2323
Female, age 91, left hemisphere
137.7
2451
Male, age 74, both hemispheres
127.7
Superior olive nTPM: 174.5
1875
Female, age 85, both hemispheres
204.8
2020
Male, age 76, both hemispheres
188.2
2364
Male, age 74, right hemisphere
187.5
2329
Male, age 80, right hemisphere
153.3
2561
Female, age 91, both hemispheres
138.5
Ventral periolivary nuclei nTPM: 170.7
2023
Male, age 76, both hemispheres
196.6
2165
Male, age 80, both hemispheres
175.6
2130
Female, age 85, both hemispheres
172.3
2794
Female, age 91, left hemisphere
138.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 157.9
1959
Male, age 76, both hemispheres
174.3
2449
Male, age 74, both hemispheres
173.8
2840
Female, age 85, both hemispheres
165.2
2161
Male, age 80, both hemispheres
155.4
2359
Male, age 61, both hemispheres
140.0
2456
Female, age 91, both hemispheres
138.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
153.6
Pig sample
Sample description
nTPM
Pons nTPM: 153.6
Samples: 4
Max nTPM: 167.1
Min nTPM: 133.9
Sample A
Female
154.5
Sample B
Female
133.9
Sample C
Male
167.1
Sample D
Male
158.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
