HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:56.7 nTPM
HPA Brain:151.9 nTPM
GTEx:56.7 nTPM
FANTOM5:654.5 Scaled Tags Per Million
Pig:151.8 nTPM
Mouse:125.6 nTPM
Allen mouse:20.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022952Antibody HPA022970
Glial cells Not detectedNot detected
Neuronal cells MediumMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 151.9
Sample id Sample description nTPM
Hippocampus
nTPM: 128.9
1898 Male, age 80, left hemisphere 162.4
2529 Female, age 94, left hemisphere 129.6
1855 Male, age 76, left hemisphere 127.5
1911 Female, age 85, right hemisphere 121.5
2148 Female, age 91, left hemisphere 116.9
2621 Female, age 67, right hemisphere 115.5
Dentate gyrus
nTPM: 134.1
1927 Female, age 91, both hemispheres 150.7
2010 Male, age 76, both hemispheres 146.5
2530 Female, age 94, left hemisphere 134.0
2246 Female, age 85, both hemispheres 131.7
2528 Male, age 74, both hemispheres 128.2
2531 Female, age 67, both hemispheres 113.7
Entorhinal gyrus
nTPM: 133.8
2764 Male, age 80, right hemisphere 150.4
1938 Female, age 85, left hemisphere 147.6
2117 Female, age 91, right hemisphere 132.7
2686 Male, age 75, right hemisphere 128.0
1787 Male, age 76, left hemisphere 124.8
2613 Female, age 94, left hemisphere 119.3
Hippocampus, CA1
nTPM: 145.1
2749 Male, age 80, left hemisphere 191.9
1873 Female, age 85, both hemispheres 149.2
2045 Male, age 76, both hemispheres 131.0
2527 Male, age 74, both hemispheres 130.2
2082 Female, age 91, right hemisphere 123.5
Hippocampus, CA2
nTPM: 138.4
1892 Male, age 76, both hemispheres 164.6
1963 Male, age 80, left hemisphere 163.7
2249 Male, age 74, both hemispheres 136.9
1940 Female, age 85, left hemisphere 124.1
2437 Female, age 94, left hemisphere 121.3
2113 Female, age 91, right hemisphere 119.8
Hippocampus, CA3
nTPM: 126.0
2137 Male, age 80, left hemisphere 161.5
1867 Male, age 76, both hemispheres 148.2
1891 Female, age 85, both hemispheres 133.9
2436 Male, age 74, both hemispheres 114.5
2620 Female, age 94, left hemisphere 106.1
2861 Female, age 67, both hemispheres 91.4
Parahippocampal cortex
nTPM: 134.2
1850 Male, age 80, both hemispheres 171.6
1933 Female, age 85, both hemispheres 149.8
1990 Female, age 91, right hemisphere 143.3
2245 Female, age 91, both hemispheres 135.6
2250 Female, age 67, right hemisphere 132.9
2532 Female, age 72, left hemisphere 129.2
2693 Female, age 94, both hemispheres 128.2
2018 Male, age 76, both hemispheres 125.8
2692 Male, age 74, both hemispheres 124.9
2622 Female, age 67, right hemisphere 100.2
Perirhinal gyrus
nTPM: 151.9
1794 Male, age 80, right hemisphere 159.7
1841 Female, age 85, right hemisphere 156.7
1847 Female, age 91, left hemisphere 156.0
2521 Female, age 94, right hemisphere 149.7
2848 Male, age 76, right hemisphere 137.3
Subiculum
nTPM: 130.9
1977 Female, age 85, both hemispheres 151.5
1901 Male, age 80, both hemispheres 143.4
2042 Male, age 76, both hemispheres 130.7
2438 Female, age 94, left hemisphere 124.5
2619 Male, age 74, both hemispheres 121.3
2729 Female, age 91, right hemisphere 114.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.7
Samples: 197

Max nTPM: 91.1
Min nTPM: 31.6
Std nTPM: 10.7
Median nTPM: 55.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 91.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 89.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 88.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 82.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 80.8
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 80.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 79.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 79.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 76.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 76.2
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 74.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 654.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 654.5
FF:10169-103B7 60 years, female 940.9
FF:10153-102I9 76 years, female 368.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 151.8
Pig sample Sample description nTPM
Subiculum
nTPM: 131.0
Samples: 4

Max nTPM: 150.3
Min nTPM: 123.2
Sample A Female 150.3
Sample B Female 123.2
Sample C Male 124.8
Sample D Male 125.8
Dorsal hippocampus
nTPM: 151.8
Samples: 4

Max nTPM: 174.3
Min nTPM: 130.1
Sample A Female 174.3
Sample B Female 158.5
Sample C Male 144.2
Sample D Male 130.1
Entorhinal cortex
nTPM: 124.9
Samples: 4

Max nTPM: 134.6
Min nTPM: 114.1
Sample A Female 125.6
Sample B Female 134.6
Sample C Male 125.4
Sample D Male 114.1
Ventral hippocampus
nTPM: 130.6
Samples: 4

Max nTPM: 151.8
Min nTPM: 114.6
Sample A Female 151.8
Sample B Female 119.2
Sample C Male 114.6
Sample D Male 136.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 125.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 125.6
Samples: 4

Max nTPM: 134.3
Min nTPM: 116.6
Sample A Male 116.6
Sample B Male 127.4
Sample C Female 124.1
Sample D Female 134.3
Hippocampal formation
nTPM: 115.2
Samples: 4

Max nTPM: 126.7
Min nTPM: 107.5
Sample A Male 126.7
Sample B Male 113.9
Sample C Female 112.7
Sample D Female 107.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.6
73817983 Antisense, RP_051214_01_A08, Mouse strain C57BL/6J (56 days, male) 21.2
634466 Antisense, RP_040914_01_B05, Mouse strain C57BL/6J (56 days, male) 20.1

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