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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
59.1
nTPM
GTEx:
59.1
nTPM
FANTOM5:
1852.4
Scaled Tags Per Million
Pig:
16.3
nTPM
Mouse:
3.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
59.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 59.1
Samples: 105
Max nTPM: 185.0
Min nTPM: 6.2
Std nTPM: 30.2
Median nTPM: 0.0
452_1
88 years, female
185.0
351_1
91 years, male
160.6
354_1
81 years, female
126.4
41_1
94 years, female
124.2
320_1
89 years, female
120.5
375_1
74 years, female
110.0
117_1
61 years, male
101.4
406_1
79 years, male
100.4
349_1
83 years, male
98.6
319_1
81 years, male
95.7
137_1
83 years, male
94.3
384_1
83 years, male
93.3
526_1
61 years, male
92.3
172_1
72 years, female
91.3
314_1
67 years, male
91.2
265_1
87 years, male
90.6
480_1
63 years, male
89.7
177_1
74 years, male
87.4
350_1
84 years, female
86.2
353_1
82 years, female
85.7
376_1
75 years, female
85.2
189_1
76 years, male
84.8
254_1
77 years, female
84.8
307_1
66 years, female
81.2
264_1
73 years, female
77.4
218_1
71 years, female
77.0
173_1
67 years, male
76.9
163_1
78 years, male
73.3
42_1
85 years, male
72.6
237_1
82 years, male
71.5
394_1
75 years, female
71.5
379_1
60 years, male
71.1
377_1
82 years, female
70.1
503_1
68 years, male
69.5
99_1
64 years, male
68.8
348_1
84 years, male
65.3
317_1
60 years, male
62.7
318_1
68 years, male
62.2
293_1
68 years, female
61.4
447_1
81 years, male
61.1
2_1
77 years, female
60.9
389_1
86 years, female
60.8
4_1
88 years, female
58.4
295_1
61 years, female
56.3
321_1
62 years, female
56.0
316_1
62 years, male
55.5
6_1
73 years, female
55.1
145_1
84 years, male
55.1
414_1
84 years, female
55.1
109_1
81 years, female
55.0
356_1
87 years, female
54.7
425_1
59 years, female
54.6
506_1
65 years, male
53.6
243_1
75 years, male
53.2
115_1
83 years, male
52.9
286_1
68 years, female
52.3
266_1
85 years, male
51.8
335_1
73 years, female
51.1
315_1
62 years, female
51.0
291_1
76 years, male
49.7
347_1
72 years, male
48.4
386_1
76 years, male
48.0
324_1
76 years, male
47.8
17_1
71 years, male
47.7
518_1
75 years, female
46.9
468_1
89 years, male
46.6
322_1
76 years, male
45.9
308_1
70 years, female
45.8
404_1
82 years, female
45.8
9_1
66 years, female
45.1
126_1
63 years, male
43.9
251_1
78 years, male
43.1
153_1
70 years, female
42.1
311_1
78 years, male
41.9
355_1
70 years, female
41.5
396_1
62 years, male
41.4
495_1
57 years, female
41.1
501_1
88 years, male
40.3
517_1
88 years, male
40.2
405_1
91 years, male
40.0
162_1
79 years, female
38.0
313_1
79 years, female
37.3
120_1
70 years, female
36.1
229_1
69 years, female
34.0
415_1
77 years, female
33.5
35_1
74 years, female
31.9
81_1
67 years, male
31.0
352_1
62 years, male
30.7
18_1
88 years, male
30.2
246_1
77 years, male
28.4
292_1
71 years, male
28.3
119_1
70 years, female
28.2
499_1
55 years, female
27.3
32_1
67 years, male
27.1
43_1
64 years, female
26.6
491_1
89 years, female
26.1
142_1
61 years, female
24.7
490_1
67 years, female
23.6
466_1
57 years, female
22.4
217_1
76 years, male
22.3
139_1
64 years, female
17.4
89_1
63 years, male
16.2
413_1
59 years, female
14.1
149_1
88 years, male
11.2
288_1
66 years, female
6.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
