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IMMUNE CELL B-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cell proteome
B-cells
B-CELLS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA:28192.5 nTPM
Monaco:28745.4 nTPM
Schmiedel:8305.8 TPM

B-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM 28192.5
HPA sample nTPM
Memory B-cell
nTPM: 27121.3
Samples: 6

Max nTPM: 52188.5
Min nTPM: 19865.2
P10809_1017 19865.2
P10809_1025 26914.5
P10809_1044 52188.5
P10809_1063 21642.9
P10809_1092 21349.0
P10809_1105 20767.4
Naive B-cell
nTPM: 28192.6
Samples: 6

Max nTPM: 44067.7
Min nTPM: 20519.9
P10809_1011 20519.9
P10809_1029 28861.2
P10809_1048 44067.7
P10809_1067 22240.5
P10809_1091 27803.6
P10809_1104 25662.4

B-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max nTPM 28745.4
Monaco sample nTPM
Exhausted memory B-cell
nTPM: 27641.0
Samples: 4

Max nTPM: 34649.4
Min nTPM: 16430.0
RHH5310_R3677 34649.4
RHH5218_R3590 24985.3
RHH5247_R3619 34499.4
RHH5276_R3648 16430.0
Naive B-cell
nTPM: 26971.7
Samples: 4

Max nTPM: 34132.8
Min nTPM: 15819.6
RHH5308_R3675 31454.1
RHH5216_R3588 34132.8
RHH5245_R3617 15819.6
RHH5274_R3646 26480.1
Non-switched memory B-cell
nTPM: 26968.4
Samples: 4

Max nTPM: 39404.5
Min nTPM: 14433.7
RHH5309_R3676 28857.3
RHH5217_R3589 25177.9
RHH5246_R3618 39404.5
RHH5275_R3647 14433.7
Plasmablast
nTPM: 4817.0
Samples: 4

Max nTPM: 6833.1
Min nTPM: 3503.3
RHH5312_R3679 4069.5
RHH5220_R3592 4862.0
RHH5249_R3621 6833.1
RHH5278_R3650 3503.3
Switched memory B-cell
nTPM: 28745.4
Samples: 4

Max nTPM: 39351.8
Min nTPM: 18382.4
RHH5311_R3678 39351.8
RHH5219_R3591 29721.0
RHH5248_R3620 27526.2
RHH5277_R3649 18382.4

B-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max TPM 8305.8
Schmiedel sample id TPM
Naive B-cell
TPM: 8305.8
Samples: 91

Max TPM: 13468.7
Min TPM: 3048.4
B_CELL_NAIVE_1 13468.7
B_CELL_NAIVE_2 12508.0
B_CELL_NAIVE_3 12242.9
B_CELL_NAIVE_4 11912.4
B_CELL_NAIVE_5 11898.7
B_CELL_NAIVE_6 11404.9
B_CELL_NAIVE_7 11159.7
B_CELL_NAIVE_8 10915.6
B_CELL_NAIVE_9 10687.0
B_CELL_NAIVE_10 10669.8
B_CELL_NAIVE_11 10637.6
B_CELL_NAIVE_12 10623.1
B_CELL_NAIVE_13 10259.4
B_CELL_NAIVE_14 10152.1
B_CELL_NAIVE_15 10056.9
B_CELL_NAIVE_16 9980.7
B_CELL_NAIVE_17 9831.0
B_CELL_NAIVE_18 9801.6
B_CELL_NAIVE_19 9698.4
B_CELL_NAIVE_20 9631.9
B_CELL_NAIVE_21 9544.7
B_CELL_NAIVE_22 9483.3
B_CELL_NAIVE_23 9440.8
B_CELL_NAIVE_24 9416.8
B_CELL_NAIVE_25 9404.8
B_CELL_NAIVE_26 9367.4
B_CELL_NAIVE_27 9329.0
B_CELL_NAIVE_28 9287.4
B_CELL_NAIVE_29 9207.3
B_CELL_NAIVE_30 9171.1
B_CELL_NAIVE_31 9164.2
B_CELL_NAIVE_32 9066.4
B_CELL_NAIVE_33 9018.3
B_CELL_NAIVE_34 8990.4
B_CELL_NAIVE_35 8983.2
B_CELL_NAIVE_36 8978.5
B_CELL_NAIVE_37 8923.4
B_CELL_NAIVE_38 8880.2
B_CELL_NAIVE_39 8845.2
B_CELL_NAIVE_40 8754.6
B_CELL_NAIVE_41 8741.1
B_CELL_NAIVE_42 8723.2
B_CELL_NAIVE_43 8673.4
B_CELL_NAIVE_44 8664.8
B_CELL_NAIVE_45 8615.4
B_CELL_NAIVE_46 8578.3
B_CELL_NAIVE_47 8540.5
B_CELL_NAIVE_48 8535.4
B_CELL_NAIVE_49 8516.8
B_CELL_NAIVE_50 8367.1
B_CELL_NAIVE_51 8365.0
B_CELL_NAIVE_52 8339.7
B_CELL_NAIVE_53 8220.0
B_CELL_NAIVE_54 8214.7
B_CELL_NAIVE_55 8210.4
B_CELL_NAIVE_56 8163.4
B_CELL_NAIVE_57 8032.5
B_CELL_NAIVE_58 8013.3
B_CELL_NAIVE_59 7905.2
B_CELL_NAIVE_60 7894.9
B_CELL_NAIVE_61 7888.4
B_CELL_NAIVE_62 7865.5
B_CELL_NAIVE_63 7843.9
B_CELL_NAIVE_64 7607.7
B_CELL_NAIVE_65 7598.6
B_CELL_NAIVE_66 7494.4
B_CELL_NAIVE_67 7477.6
B_CELL_NAIVE_68 7310.2
B_CELL_NAIVE_69 7188.6
B_CELL_NAIVE_70 7145.2
B_CELL_NAIVE_71 7110.8
B_CELL_NAIVE_72 7079.8
B_CELL_NAIVE_73 6963.2
B_CELL_NAIVE_74 6952.5
B_CELL_NAIVE_75 6601.2
B_CELL_NAIVE_76 6351.2
B_CELL_NAIVE_77 6324.2
B_CELL_NAIVE_78 5981.0
B_CELL_NAIVE_79 5840.9
B_CELL_NAIVE_80 5825.2
B_CELL_NAIVE_81 5719.1
B_CELL_NAIVE_82 5356.0
B_CELL_NAIVE_83 5204.0
B_CELL_NAIVE_84 5075.9
B_CELL_NAIVE_85 4712.4
B_CELL_NAIVE_86 4003.1
B_CELL_NAIVE_87 3782.9
B_CELL_NAIVE_88 3541.3
B_CELL_NAIVE_89 3505.5
B_CELL_NAIVE_90 3312.2
B_CELL_NAIVE_91 3048.4
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