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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1359.3
nTPM
FANTOM5:
1238.2
Scaled Tags Per Million
Pig:
779.8
nTPM
Allen mouse:
4.9
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
1359.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 1359.3
2301
Female, age 85, both hemispheres
1725.3
2090
Male, age 80, both hemispheres
1459.5
2188
Female, age 91, both hemispheres
1370.7
1984
Male, age 76, both hemispheres
881.6
Dorsal cochlear nucleus nTPM: 1268.0
2802
Male, age 74, right hemisphere
1449.0
2378
Male, age 80, both hemispheres
1325.8
2187
Female, age 91, both hemispheres
1265.9
2370
Male, age 61, both hemispheres
1156.8
2058
Male, age 76, both hemispheres
1142.4
Dorsal tegmental nucleus nTPM: 1089.7
2083
Male, age 80, both hemispheres
1305.3
2326
Male, age 74, both hemispheres
1151.6
1936
Male, age 76, left hemisphere
1125.3
2358
Male, age 61, both hemispheres
776.5
Dorsolateral tegmental area nTPM: 1030.8
2654
Male, age 80, both hemispheres
1349.5
2751
Female, age 85, both hemispheres
1249.4
2337
Male, age 61, both hemispheres
914.1
2141
Male, age 76, both hemispheres
821.5
2360
Male, age 74, both hemispheres
819.8
Kolliker-Fuse nucleus nTPM: 1296.9
2315
Male, age 76, right hemisphere
1477.1
2793
Female, age 91, left hemisphere
1314.5
2163
Male, age 80, both hemispheres
1099.2
Lateral lemniscal nuclei nTPM: 870.3
2320
Female, age 91, left hemisphere
971.4
2169
Male, age 76, both hemispheres
899.6
2746
Female, age 85, left hemisphere
868.2
2453
Male, age 74, right hemisphere
828.5
2036
Male, age 80, both hemispheres
783.8
Lateral parabrachial nucleus nTPM: 1211.8
2792
Male, age 76, both hemispheres
1852.4
2013
Male, age 80, both hemispheres
1163.0
2139
Female, age 85, right hemisphere
959.6
2790
Male, age 61, both hemispheres
872.2
Lateral vestibular nucleus nTPM: 1329.9
2311
Male, age 80, both hemispheres
1491.6
2184
Male, age 76, both hemispheres
1168.3
Locus coeruleus nTPM: 718.5
2162
Male, age 80, both hemispheres
862.2
2720
Male, age 74, both hemispheres
853.6
2317
Female, age 72, unknown
779.0
2123
Female, age 91, both hemispheres
694.7
1980
Male, age 76, both hemispheres
647.5
2014
Male, age 55, unknown
597.2
2788
Male, age 74, unknown
595.1
Medial parabrachial nucleus nTPM: 1190.7
2170
Female, age 91, both hemispheres
1421.3
2463
Female, age 85, right hemisphere
1260.9
2854
Male, age 80, both hemispheres
1143.7
2786
Male, age 76, both hemispheres
1141.3
2156
Male, age 61, both hemispheres
986.4
Medial periolivary nuclei nTPM: 942.8
2081
Male, age 80, both hemispheres
1232.3
2458
Female, age 91, both hemispheres
1032.5
2063
Male, age 76, both hemispheres
902.1
2791
Male, age 74, right hemisphere
885.2
2171
Female, age 85, both hemispheres
662.0
Motor facial nucleus nTPM: 1044.9
2126
Male, age 61, both hemispheres
1352.4
2697
Female, age 85, both hemispheres
1180.4
2795
Female, age 91, both hemispheres
1076.7
2365
Male, age 74, right hemisphere
897.7
2062
Male, age 76, both hemispheres
882.7
2327
Male, age 80, both hemispheres
879.5
Motor trigeminal nucleus nTPM: 1048.3
2321
Female, age 91, both hemispheres
1243.6
2309
Male, age 76, both hemispheres
1172.0
2560
Male, age 74, both hemispheres
999.7
2335
Male, age 61, both hemispheres
999.5
2079
Male, age 80, both hemispheres
826.9
Nuclei of the trapezoid body nTPM: 974.8
2166
Male, age 80, both hemispheres
1245.5
2368
Female, age 91, both hemispheres
1053.8
2159
Male, age 61, both hemispheres
1026.8
1983
Male, age 76, both hemispheres
956.7
2735
Female, age 85, both hemispheres
591.2
Nucleus raphe magnus nTPM: 820.0
2051
Male, age 76, both hemispheres
1088.4
2328
Male, age 80, both hemispheres
991.0
2459
Female, age 91, both hemispheres
929.8
2455
Male, age 74, both hemispheres
783.5
2160
Male, age 61, both hemispheres
631.1
2172
Female, age 85, both hemispheres
496.1
Paramedian reticular nucleus nTPM: 1034.7
2052
Male, age 76, both hemispheres
1196.1
2057
Male, age 80, both hemispheres
1104.9
2313
Male, age 61, both hemispheres
963.4
2050
Female, age 85, both hemispheres
874.4
Pedunculopontine tegmental nucleus nTPM: 932.0
2334
Male, age 80, both hemispheres
1075.2
1921
Female, age 85, both hemispheres
888.3
2338
Male, age 61, both hemispheres
832.7
Pontine nuclei nTPM: 952.0
2319
Female, age 91, both hemispheres
1258.2
2115
Male, age 80, left hemisphere
1172.5
1968
Male, age 76, left hemisphere
1061.1
2454
Male, age 74, left hemisphere
992.8
2109
Female, age 72, unknown
992.2
1863
Male, age 55, unknown
815.8
2787
Female, age 85, both hemispheres
678.1
2727
Male, age 61, right hemisphere
644.9
Pontine raphe nucleus nTPM: 852.3
2853
Male, age 76, midline
972.5
2122
Female, age 85, midline
732.2
Posteroventral cochlear nucleus nTPM: 1341.3
2341
Male, age 80, both hemispheres
1651.4
2135
Female, age 91, both hemispheres
1613.0
2371
Male, age 61, both hemispheres
1463.6
2070
Male, age 76, both hemispheres
1048.5
2752
Female, age 85, both hemispheres
929.9
Principal sensory trigeminal nucleus nTPM: 993.5
2324
Male, age 76, both hemispheres
1269.6
2367
Female, age 91, left hemisphere
1139.0
2158
Male, age 61, both hemispheres
834.0
2008
Male, age 80, left hemisphere
731.3
Reticular pontine nucleus, caudal nTPM: 1011.3
2092
Male, age 76, both hemispheres
1129.0
2559
Male, age 74, both hemispheres
1127.1
2457
Female, age 91, both hemispheres
1042.9
2332
Male, age 80, right hemisphere
746.2
Reticular pontine nucleus, oral nTPM: 1067.0
1939
Male, age 80, both hemispheres
1186.9
2167
Male, age 76, both hemispheres
1162.4
2366
Female, age 91, both hemispheres
1131.7
2361
Male, age 74, both hemispheres
946.7
2012
Female, age 85, both hemispheres
907.5
Reticulotegmental nucleus nTPM: 1047.6
2322
Female, age 91, both hemispheres
1191.9
2333
Male, age 80, both hemispheres
1075.7
2452
Male, age 74, both hemispheres
1069.3
2325
Male, age 76, both hemispheres
853.7
Spinal trigeminal nucleus, oral nTPM: 967.4
2164
Male, age 80, both hemispheres
1158.0
1978
Male, age 76, both hemispheres
926.7
2737
Female, age 85, both hemispheres
817.6
Subcoeruleus area nTPM: 1001.5
2369
Female, age 85, left hemisphere
1381.0
2451
Male, age 74, both hemispheres
1020.7
2089
Male, age 76, left hemisphere
941.5
1958
Male, age 80, both hemispheres
925.8
2323
Female, age 91, left hemisphere
738.5
Superior olive nTPM: 1002.9
2020
Male, age 76, both hemispheres
1234.0
2329
Male, age 80, right hemisphere
1095.4
2561
Female, age 91, both hemispheres
1056.7
2364
Male, age 74, right hemisphere
889.3
1875
Female, age 85, both hemispheres
738.9
Ventral periolivary nuclei nTPM: 934.5
2023
Male, age 76, both hemispheres
1169.1
2165
Male, age 80, both hemispheres
970.5
2794
Female, age 91, left hemisphere
873.4
2130
Female, age 85, both hemispheres
724.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 967.6
2456
Female, age 91, both hemispheres
1131.8
2161
Male, age 80, both hemispheres
1038.8
2840
Female, age 85, both hemispheres
1037.7
1959
Male, age 76, both hemispheres
982.4
2359
Male, age 61, both hemispheres
832.1
2449
Male, age 74, both hemispheres
782.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
779.8
Pig sample
Sample description
nTPM
Pons nTPM: 779.8
Samples: 4
Max nTPM: 1151.0
Min nTPM: 472.0
Sample A
Female
472.0
Sample B
Female
565.2
Sample C
Male
930.8
Sample D
Male
1151.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
