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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
84.0
nTPM
Monaco:
173.7
nTPM
Schmiedel:
49.5
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
84.0
HPA sample
nTPM
gdT-cell nTPM: 17.2
Samples: 6
Max nTPM: 29.6
Min nTPM: 11.4
P10809_1007
12.5
P10809_1022
24.9
P10809_1041
29.6
P10809_1060
11.7
P10809_1077
12.8
P10809_1098
11.4
MAIT T-cell nTPM: 41.6
Samples: 6
Max nTPM: 57.5
Min nTPM: 24.7
P10809_1006
24.7
P10809_1024
50.0
P10809_1043
44.2
P10809_1062
38.6
P10809_1083
34.5
P10809_1097
57.5
Memory CD4 T-cell nTPM: 41.5
Samples: 6
Max nTPM: 61.0
Min nTPM: 33.7
P10809_1014
35.8
P10809_1026
61.0
P10809_1045
39.2
P10809_1064
33.7
P10809_1086
34.7
P10809_1113
44.6
Memory CD8 T-cell nTPM: 30.6
Samples: 5
Max nTPM: 36.1
Min nTPM: 18.9
P10809_1012
35.2
P10809_1027
29.4
P10809_1046
36.1
P10809_1065
18.9
P10809_1111
33.5
Naive CD4 T-cell nTPM: 84.0
Samples: 6
Max nTPM: 114.8
Min nTPM: 59.1
P10809_1015
59.1
P10809_1030
109.8
P10809_1049
114.8
P10809_1068
67.2
P10809_1085
71.8
P10809_1112
81.3
Naive CD8 T-cell nTPM: 47.5
Samples: 6
Max nTPM: 61.1
Min nTPM: 22.0
P10809_1016
61.1
P10809_1031
54.5
P10809_1050
50.1
P10809_1069
42.0
P10809_1087
22.0
P10809_1110
55.2
T-reg nTPM: 27.0
Samples: 6
Max nTPM: 36.4
Min nTPM: 15.2
P10809_1018
22.1
P10809_1037
33.4
P10809_1056
36.4
P10809_1075
15.2
P10809_1094
34.3
P10809_1106
20.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
173.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 72.1
Samples: 4
Max nTPM: 85.5
Min nTPM: 57.7
RHH5202_R3573
60.3
RHH5230_R3602
85.0
RHH5259_R3631
57.7
RHH5288_R3660
85.5
Effector memory CD8 T-cell nTPM: 39.1
Samples: 4
Max nTPM: 43.6
Min nTPM: 35.4
RHH5203_R3574
35.4
RHH5231_R3603
37.4
RHH5260_R3632
39.9
RHH5289_R3661
43.6
MAIT T-cell nTPM: 71.2
Samples: 4
Max nTPM: 83.7
Min nTPM: 55.1
RHH5233_R3605
77.8
RHH5205_R3576
83.7
RHH5262_R3634
55.1
RHH5297_R3663
68.2
Memory CD4 T-cell TFH nTPM: 119.7
Samples: 4
Max nTPM: 159.3
Min nTPM: 101.6
RHH5300_R3666
101.6
RHH5236_R3608
159.3
RHH5265_R3637
105.1
RHH5208_R3579
112.8
Memory CD4 T-cell Th1 nTPM: 88.2
Samples: 4
Max nTPM: 128.0
Min nTPM: 56.4
RHH5210_R3581
128.0
RHH5302_R3668
104.4
RHH5238_R3610
56.4
RHH5267_R3639
64.1
Memory CD4 T-cell Th1/Th17 nTPM: 71.0
Samples: 4
Max nTPM: 80.9
Min nTPM: 61.9
RHH5303_R3669
80.9
RHH5211_R3582
76.5
RHH5239_R3611
61.9
RHH5268_R3640
64.8
Memory CD4 T-cell Th17 nTPM: 84.8
Samples: 4
Max nTPM: 90.8
Min nTPM: 79.2
RHH5304_R3670
81.8
RHH5212_R3583
87.4
RHH5240_R3612
90.8
RHH5269_R3641
79.2
Memory CD4 T-cell Th2 nTPM: 109.6
Samples: 4
Max nTPM: 138.2
Min nTPM: 69.2
RHH5305_R3671
138.2
RHH5213_R3584
104.5
RHH5241_R3613
126.5
RHH5270_R3642
69.2
Naive CD4 T-cell nTPM: 169.8
Samples: 4
Max nTPM: 180.5
Min nTPM: 149.8
RHH5306_R3672
170.7
RHH5214_R3585
149.8
RHH5242_R3614
178.2
RHH5271_R3643
180.5
Naive CD8 T-cell nTPM: 173.7
Samples: 4
Max nTPM: 215.3
Min nTPM: 123.7
RHH5201_R3572
215.3
RHH5229_R3601
123.7
RHH5258_R3630
195.2
RHH5287_R3659
160.4
Non-Vd2 gdTCR nTPM: 26.8
Samples: 4
Max nTPM: 37.1
Min nTPM: 15.1
RHH5235_R3607
23.6
RHH5264_R3636
15.1
RHH5207_R3578
31.5
RHH5299_R3665
37.1
T-reg nTPM: 103.5
Samples: 4
Max nTPM: 115.3
Min nTPM: 92.3
RHH5301_R3667
97.9
RHH5237_R3609
115.3
RHH5266_R3638
92.3
RHH5209_R3580
108.4
Terminal effector memory CD4 T-cell nTPM: 44.2
Samples: 2
Max nTPM: 49.0
Min nTPM: 39.3
RHH5243_R3615
49.0
RHH5272_R3644
39.3
Terminal effector memory CD8 T-cell nTPM: 38.1
Samples: 4
Max nTPM: 47.4
Min nTPM: 25.4
RHH5232_R3604
25.4
RHH5204_R3575
35.5
RHH5261_R3633
44.1
RHH5296_R3662
47.4
Vd2 gdTCR nTPM: 54.6
Samples: 4
Max nTPM: 75.5
Min nTPM: 36.0
RHH5234_R3606
75.5
RHH5206_R3577
36.0
RHH5263_R3635
51.3
RHH5298_R3664
55.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
