We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
58.5
nTPM
Monaco:
131.7
nTPM
Schmiedel:
132.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.5
HPA sample
nTPM
gdT-cell nTPM: 53.4
Samples: 6
Max nTPM: 63.2
Min nTPM: 44.8
P10809_1007
63.2
P10809_1022
56.3
P10809_1041
45.1
P10809_1060
44.8
P10809_1077
58.0
P10809_1098
52.7
MAIT T-cell nTPM: 45.8
Samples: 6
Max nTPM: 56.0
Min nTPM: 33.1
P10809_1006
46.5
P10809_1024
49.8
P10809_1043
35.4
P10809_1062
33.1
P10809_1083
54.0
P10809_1097
56.0
Memory CD4 T-cell nTPM: 48.2
Samples: 6
Max nTPM: 57.8
Min nTPM: 36.8
P10809_1014
56.4
P10809_1026
36.8
P10809_1045
45.6
P10809_1064
39.6
P10809_1086
52.7
P10809_1113
57.8
Memory CD8 T-cell nTPM: 48.4
Samples: 5
Max nTPM: 56.9
Min nTPM: 38.8
P10809_1012
50.5
P10809_1027
52.8
P10809_1046
38.8
P10809_1065
42.8
P10809_1111
56.9
Naive CD4 T-cell nTPM: 47.4
Samples: 6
Max nTPM: 57.2
Min nTPM: 37.1
P10809_1015
57.2
P10809_1030
37.1
P10809_1049
42.9
P10809_1068
44.2
P10809_1085
48.3
P10809_1112
54.8
Naive CD8 T-cell nTPM: 50.7
Samples: 6
Max nTPM: 60.4
Min nTPM: 39.8
P10809_1016
49.9
P10809_1031
40.7
P10809_1050
39.8
P10809_1069
55.9
P10809_1087
60.4
P10809_1110
57.2
T-reg nTPM: 58.6
Samples: 6
Max nTPM: 75.1
Min nTPM: 45.6
P10809_1018
50.2
P10809_1037
72.2
P10809_1056
45.6
P10809_1075
46.8
P10809_1094
75.1
P10809_1106
61.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
131.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 98.1
Samples: 4
Max nTPM: 113.2
Min nTPM: 77.7
RHH5202_R3573
105.4
RHH5230_R3602
113.2
RHH5259_R3631
96.1
RHH5288_R3660
77.7
Effector memory CD8 T-cell nTPM: 116.4
Samples: 4
Max nTPM: 132.1
Min nTPM: 89.3
RHH5203_R3574
127.1
RHH5231_R3603
89.3
RHH5260_R3632
117.2
RHH5289_R3661
132.1
MAIT T-cell nTPM: 85.0
Samples: 4
Max nTPM: 88.0
Min nTPM: 79.7
RHH5233_R3605
87.4
RHH5205_R3576
88.0
RHH5262_R3634
79.7
RHH5297_R3663
84.7
Memory CD4 T-cell TFH nTPM: 105.0
Samples: 4
Max nTPM: 123.2
Min nTPM: 84.8
RHH5300_R3666
84.8
RHH5236_R3608
94.8
RHH5265_R3637
117.3
RHH5208_R3579
123.2
Memory CD4 T-cell Th1 nTPM: 102.2
Samples: 4
Max nTPM: 128.8
Min nTPM: 73.2
RHH5210_R3581
128.8
RHH5302_R3668
92.5
RHH5238_R3610
73.2
RHH5267_R3639
114.3
Memory CD4 T-cell Th1/Th17 nTPM: 113.8
Samples: 4
Max nTPM: 143.3
Min nTPM: 87.6
RHH5303_R3669
107.6
RHH5211_R3582
143.3
RHH5239_R3611
87.6
RHH5268_R3640
116.5
Memory CD4 T-cell Th17 nTPM: 119.9
Samples: 4
Max nTPM: 130.1
Min nTPM: 108.4
RHH5304_R3670
114.1
RHH5212_R3583
130.1
RHH5240_R3612
127.1
RHH5269_R3641
108.4
Memory CD4 T-cell Th2 nTPM: 116.9
Samples: 4
Max nTPM: 133.8
Min nTPM: 101.9
RHH5305_R3671
101.9
RHH5213_R3584
133.8
RHH5241_R3613
121.9
RHH5270_R3642
110.0
Naive CD4 T-cell nTPM: 103.0
Samples: 4
Max nTPM: 131.3
Min nTPM: 79.7
RHH5306_R3672
79.7
RHH5214_R3585
114.4
RHH5242_R3614
86.4
RHH5271_R3643
131.3
Naive CD8 T-cell nTPM: 117.7
Samples: 4
Max nTPM: 134.5
Min nTPM: 92.7
RHH5201_R3572
134.5
RHH5229_R3601
92.7
RHH5258_R3630
112.4
RHH5287_R3659
131.2
Non-Vd2 gdTCR nTPM: 123.1
Samples: 4
Max nTPM: 149.9
Min nTPM: 104.1
RHH5235_R3607
104.1
RHH5264_R3636
125.0
RHH5207_R3578
149.9
RHH5299_R3665
113.5
T-reg nTPM: 92.3
Samples: 4
Max nTPM: 103.0
Min nTPM: 71.3
RHH5301_R3667
71.3
RHH5237_R3609
99.8
RHH5266_R3638
94.9
RHH5209_R3580
103.0
Terminal effector memory CD4 T-cell nTPM: 121.9
Samples: 2
Max nTPM: 126.6
Min nTPM: 117.1
RHH5243_R3615
126.6
RHH5272_R3644
117.1
Terminal effector memory CD8 T-cell nTPM: 131.7
Samples: 4
Max nTPM: 154.9
Min nTPM: 110.1
RHH5232_R3604
110.1
RHH5204_R3575
125.0
RHH5261_R3633
136.9
RHH5296_R3662
154.9
Vd2 gdTCR nTPM: 105.4
Samples: 4
Max nTPM: 158.9
Min nTPM: 71.5
RHH5234_R3606
78.3
RHH5206_R3577
158.9
RHH5263_R3635
112.7
RHH5298_R3664
71.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
