HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:3.0 nTPM
HPA Brain:12.1 nTPM
GTEx:3.0 nTPM
FANTOM5:24.6 Scaled Tags Per Million
Pig:28.3 nTPM
Mouse:16.2 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.1
Sample id Sample description nTPM
Hippocampus
nTPM: 10.3
1898 Male, age 80, left hemisphere 11.8
2148 Female, age 91, left hemisphere 10.8
1911 Female, age 85, right hemisphere 10.7
2529 Female, age 94, left hemisphere 10.4
2621 Female, age 67, right hemisphere 10.4
1855 Male, age 76, left hemisphere 7.7
Dentate gyrus
nTPM: 11.3
2528 Male, age 74, both hemispheres 14.2
2010 Male, age 76, both hemispheres 12.3
2530 Female, age 94, left hemisphere 11.3
1927 Female, age 91, both hemispheres 11.0
2246 Female, age 85, both hemispheres 10.1
2531 Female, age 67, both hemispheres 9.0
Entorhinal gyrus
nTPM: 10.4
1938 Female, age 85, left hemisphere 12.4
2117 Female, age 91, right hemisphere 11.2
1787 Male, age 76, left hemisphere 10.7
2613 Female, age 94, left hemisphere 10.1
2764 Male, age 80, right hemisphere 9.1
2686 Male, age 75, right hemisphere 8.7
Hippocampus, CA1
nTPM: 11.3
2045 Male, age 76, both hemispheres 12.5
2749 Male, age 80, left hemisphere 11.7
2527 Male, age 74, both hemispheres 11.6
1873 Female, age 85, both hemispheres 11.4
2082 Female, age 91, right hemisphere 9.3
Hippocampus, CA2
nTPM: 10.4
1892 Male, age 76, both hemispheres 11.4
2113 Female, age 91, right hemisphere 10.7
2249 Male, age 74, both hemispheres 10.7
1963 Male, age 80, left hemisphere 10.4
2437 Female, age 94, left hemisphere 9.8
1940 Female, age 85, left hemisphere 9.3
Hippocampus, CA3
nTPM: 11.0
1867 Male, age 76, both hemispheres 12.0
2137 Male, age 80, left hemisphere 12.0
2436 Male, age 74, both hemispheres 11.7
1891 Female, age 85, both hemispheres 11.3
2620 Female, age 94, left hemisphere 10.5
2861 Female, age 67, both hemispheres 8.6
Parahippocampal cortex
nTPM: 11.2
1850 Male, age 80, both hemispheres 13.0
2532 Female, age 72, left hemisphere 12.1
2693 Female, age 94, both hemispheres 11.7
2018 Male, age 76, both hemispheres 11.6
1933 Female, age 85, both hemispheres 11.1
1990 Female, age 91, right hemisphere 11.0
2622 Female, age 67, right hemisphere 10.6
2245 Female, age 91, both hemispheres 10.5
2250 Female, age 67, right hemisphere 10.5
2692 Male, age 74, both hemispheres 10.3
Perirhinal gyrus
nTPM: 12.1
1841 Female, age 85, right hemisphere 14.0
2848 Male, age 76, right hemisphere 13.8
2521 Female, age 94, right hemisphere 11.4
1847 Female, age 91, left hemisphere 10.7
1794 Male, age 80, right hemisphere 10.6
Subiculum
nTPM: 10.7
1901 Male, age 80, both hemispheres 11.9
2729 Female, age 91, right hemisphere 11.9
2042 Male, age 76, both hemispheres 11.2
1977 Female, age 85, both hemispheres 10.5
2619 Male, age 74, both hemispheres 10.0
2438 Female, age 94, left hemisphere 8.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 3.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.0
Samples: 197

Max nTPM: 4.9
Min nTPM: 1.6
Std nTPM: 0.4
Median nTPM: 3.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 4.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 4.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 4.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 4.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 3.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 3.9
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 3.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 3.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 3.8
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 3.8
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 3.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.6
FF:10153-102I9 76 years, female 26.4
FF:10169-103B7 60 years, female 22.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.3
Pig sample Sample description nTPM
Subiculum
nTPM: 28.4
Samples: 4

Max nTPM: 32.1
Min nTPM: 26.8
Sample A Female 32.1
Sample B Female 27.3
Sample C Male 26.8
Sample D Male 27.2
Dorsal hippocampus
nTPM: 28.2
Samples: 4

Max nTPM: 30.3
Min nTPM: 26.4
Sample A Female 29.3
Sample B Female 26.6
Sample C Male 30.3
Sample D Male 26.4
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 28.5
Min nTPM: 24.7
Sample A Female 28.5
Sample B Female 28.5
Sample C Male 27.4
Sample D Male 24.7
Ventral hippocampus
nTPM: 26.5
Samples: 4

Max nTPM: 27.5
Min nTPM: 25.6
Sample A Female 27.5
Sample B Female 25.6
Sample C Male 26.3
Sample D Male 26.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.2
Samples: 4

Max nTPM: 17.0
Min nTPM: 15.3
Sample A Male 16.2
Sample B Male 16.3
Sample C Female 15.3
Sample D Female 17.0
Hippocampal formation
nTPM: 14.7
Samples: 4

Max nTPM: 16.4
Min nTPM: 13.0
Sample A Male 13.0
Sample B Male 15.1
Sample C Female 16.4
Sample D Female 14.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70528240 Antisense, RP_050623_02_B08, Mouse strain C57BL/6J (56 days, male) 0.1

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