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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
152.7
nTPM
Monaco:
169.9
nTPM
Schmiedel:
63.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
152.7
HPA sample
nTPM
gdT-cell nTPM: 126.0
Samples: 6
Max nTPM: 158.1
Min nTPM: 90.5
P10809_1007
90.5
P10809_1022
157.9
P10809_1041
158.1
P10809_1060
114.9
P10809_1077
122.6
P10809_1098
111.7
MAIT T-cell nTPM: 106.4
Samples: 6
Max nTPM: 128.9
Min nTPM: 86.4
P10809_1006
90.4
P10809_1024
128.9
P10809_1043
116.1
P10809_1062
100.2
P10809_1083
86.4
P10809_1097
116.1
Memory CD4 T-cell nTPM: 106.7
Samples: 6
Max nTPM: 126.3
Min nTPM: 90.4
P10809_1014
90.4
P10809_1026
98.5
P10809_1045
126.3
P10809_1064
109.4
P10809_1086
107.9
P10809_1113
107.6
Memory CD8 T-cell nTPM: 122.5
Samples: 5
Max nTPM: 136.5
Min nTPM: 96.6
P10809_1012
96.6
P10809_1027
136.5
P10809_1046
127.9
P10809_1065
124.9
P10809_1111
126.6
Naive CD4 T-cell nTPM: 120.1
Samples: 6
Max nTPM: 145.0
Min nTPM: 96.2
P10809_1015
110.0
P10809_1030
121.2
P10809_1049
145.0
P10809_1068
121.8
P10809_1085
96.2
P10809_1112
126.3
Naive CD8 T-cell nTPM: 111.0
Samples: 6
Max nTPM: 119.7
Min nTPM: 98.8
P10809_1016
98.8
P10809_1031
119.7
P10809_1050
114.2
P10809_1069
109.0
P10809_1087
110.3
P10809_1110
113.9
T-reg nTPM: 152.7
Samples: 6
Max nTPM: 183.4
Min nTPM: 117.6
P10809_1018
117.6
P10809_1037
143.0
P10809_1056
173.1
P10809_1075
158.2
P10809_1094
140.7
P10809_1106
183.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
169.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 139.0
Samples: 4
Max nTPM: 170.4
Min nTPM: 99.4
RHH5202_R3573
170.4
RHH5230_R3602
134.1
RHH5259_R3631
99.4
RHH5288_R3660
152.1
Effector memory CD8 T-cell nTPM: 170.0
Samples: 4
Max nTPM: 229.9
Min nTPM: 131.0
RHH5203_R3574
229.9
RHH5231_R3603
146.4
RHH5260_R3632
131.0
RHH5289_R3661
172.5
MAIT T-cell nTPM: 135.1
Samples: 4
Max nTPM: 142.2
Min nTPM: 127.0
RHH5233_R3605
142.2
RHH5205_R3576
127.0
RHH5262_R3634
138.3
RHH5297_R3663
132.8
Memory CD4 T-cell TFH nTPM: 131.8
Samples: 4
Max nTPM: 146.3
Min nTPM: 108.2
RHH5300_R3666
108.2
RHH5236_R3608
146.3
RHH5265_R3637
134.1
RHH5208_R3579
138.5
Memory CD4 T-cell Th1 nTPM: 126.8
Samples: 4
Max nTPM: 152.2
Min nTPM: 83.9
RHH5210_R3581
152.2
RHH5302_R3668
129.2
RHH5238_R3610
83.9
RHH5267_R3639
141.8
Memory CD4 T-cell Th1/Th17 nTPM: 122.6
Samples: 4
Max nTPM: 172.9
Min nTPM: 71.6
RHH5303_R3669
145.4
RHH5211_R3582
172.9
RHH5239_R3611
71.6
RHH5268_R3640
100.5
Memory CD4 T-cell Th17 nTPM: 129.2
Samples: 4
Max nTPM: 157.2
Min nTPM: 111.1
RHH5304_R3670
127.5
RHH5212_R3583
157.2
RHH5240_R3612
111.1
RHH5269_R3641
121.0
Memory CD4 T-cell Th2 nTPM: 148.3
Samples: 4
Max nTPM: 152.4
Min nTPM: 145.8
RHH5305_R3671
145.8
RHH5213_R3584
152.4
RHH5241_R3613
147.2
RHH5270_R3642
147.8
Naive CD4 T-cell nTPM: 141.8
Samples: 4
Max nTPM: 192.5
Min nTPM: 109.9
RHH5306_R3672
118.6
RHH5214_R3585
192.5
RHH5242_R3614
109.9
RHH5271_R3643
146.0
Naive CD8 T-cell nTPM: 132.5
Samples: 4
Max nTPM: 171.7
Min nTPM: 88.7
RHH5201_R3572
171.7
RHH5229_R3601
88.7
RHH5258_R3630
131.6
RHH5287_R3659
137.9
Non-Vd2 gdTCR nTPM: 168.3
Samples: 4
Max nTPM: 205.7
Min nTPM: 133.7
RHH5235_R3607
133.7
RHH5264_R3636
193.7
RHH5207_R3578
205.7
RHH5299_R3665
140.0
T-reg nTPM: 133.1
Samples: 4
Max nTPM: 146.4
Min nTPM: 123.0
RHH5301_R3667
123.0
RHH5237_R3609
146.4
RHH5266_R3638
127.1
RHH5209_R3580
135.9
Terminal effector memory CD4 T-cell nTPM: 133.6
Samples: 2
Max nTPM: 140.1
Min nTPM: 127.1
RHH5243_R3615
140.1
RHH5272_R3644
127.1
Terminal effector memory CD8 T-cell nTPM: 149.2
Samples: 4
Max nTPM: 173.9
Min nTPM: 129.9
RHH5232_R3604
132.8
RHH5204_R3575
160.3
RHH5261_R3633
129.9
RHH5296_R3662
173.9
Vd2 gdTCR nTPM: 134.3
Samples: 4
Max nTPM: 162.4
Min nTPM: 98.8
RHH5234_R3606
161.1
RHH5206_R3577
162.4
RHH5263_R3635
114.8
RHH5298_R3664
98.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
