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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
60.0
nTPM
Monaco:
104.4
nTPM
Schmiedel:
52.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
60.0
HPA sample
nTPM
gdT-cell nTPM: 51.2
Samples: 6
Max nTPM: 68.2
Min nTPM: 40.9
P10809_1007
40.9
P10809_1022
68.2
P10809_1041
63.3
P10809_1060
46.5
P10809_1077
43.2
P10809_1098
45.0
MAIT T-cell nTPM: 60.0
Samples: 6
Max nTPM: 74.9
Min nTPM: 46.9
P10809_1006
46.9
P10809_1024
74.9
P10809_1043
59.2
P10809_1062
57.5
P10809_1083
52.3
P10809_1097
69.1
Memory CD4 T-cell nTPM: 55.4
Samples: 6
Max nTPM: 72.6
Min nTPM: 44.1
P10809_1014
56.7
P10809_1026
72.6
P10809_1045
48.5
P10809_1064
46.3
P10809_1086
44.1
P10809_1113
64.4
Memory CD8 T-cell nTPM: 51.1
Samples: 5
Max nTPM: 63.0
Min nTPM: 37.8
P10809_1012
58.1
P10809_1027
40.1
P10809_1046
63.0
P10809_1065
37.8
P10809_1111
56.7
Naive CD4 T-cell nTPM: 50.0
Samples: 6
Max nTPM: 57.5
Min nTPM: 42.5
P10809_1015
42.5
P10809_1030
50.7
P10809_1049
56.2
P10809_1068
49.4
P10809_1085
43.4
P10809_1112
57.5
Naive CD8 T-cell nTPM: 45.2
Samples: 6
Max nTPM: 50.4
Min nTPM: 36.9
P10809_1016
49.1
P10809_1031
50.4
P10809_1050
47.2
P10809_1069
38.7
P10809_1087
36.9
P10809_1110
48.8
T-reg nTPM: 58.5
Samples: 6
Max nTPM: 78.2
Min nTPM: 48.6
P10809_1018
55.3
P10809_1037
48.6
P10809_1056
55.9
P10809_1075
78.2
P10809_1094
56.8
P10809_1106
56.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
104.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 73.2
Samples: 4
Max nTPM: 83.7
Min nTPM: 56.5
RHH5202_R3573
77.1
RHH5230_R3602
83.7
RHH5259_R3631
56.5
RHH5288_R3660
75.5
Effector memory CD8 T-cell nTPM: 82.6
Samples: 4
Max nTPM: 97.6
Min nTPM: 73.2
RHH5203_R3574
82.8
RHH5231_R3603
76.6
RHH5260_R3632
73.2
RHH5289_R3661
97.6
MAIT T-cell nTPM: 90.4
Samples: 4
Max nTPM: 97.6
Min nTPM: 79.7
RHH5233_R3605
79.7
RHH5205_R3576
97.6
RHH5262_R3634
96.5
RHH5297_R3663
87.8
Memory CD4 T-cell TFH nTPM: 81.4
Samples: 4
Max nTPM: 91.0
Min nTPM: 72.4
RHH5300_R3666
91.0
RHH5236_R3608
87.4
RHH5265_R3637
74.8
RHH5208_R3579
72.4
Memory CD4 T-cell Th1 nTPM: 76.4
Samples: 4
Max nTPM: 84.1
Min nTPM: 57.2
RHH5210_R3581
83.3
RHH5302_R3668
84.1
RHH5238_R3610
57.2
RHH5267_R3639
80.8
Memory CD4 T-cell Th1/Th17 nTPM: 92.2
Samples: 4
Max nTPM: 127.1
Min nTPM: 49.3
RHH5303_R3669
114.0
RHH5211_R3582
127.1
RHH5239_R3611
49.3
RHH5268_R3640
78.5
Memory CD4 T-cell Th17 nTPM: 104.5
Samples: 4
Max nTPM: 114.5
Min nTPM: 90.7
RHH5304_R3670
114.3
RHH5212_R3583
98.3
RHH5240_R3612
114.5
RHH5269_R3641
90.7
Memory CD4 T-cell Th2 nTPM: 97.0
Samples: 4
Max nTPM: 107.8
Min nTPM: 80.6
RHH5305_R3671
105.7
RHH5213_R3584
107.8
RHH5241_R3613
80.6
RHH5270_R3642
93.9
Naive CD4 T-cell nTPM: 78.0
Samples: 4
Max nTPM: 86.5
Min nTPM: 67.4
RHH5306_R3672
80.6
RHH5214_R3585
86.5
RHH5242_R3614
67.4
RHH5271_R3643
77.3
Naive CD8 T-cell nTPM: 70.0
Samples: 4
Max nTPM: 84.1
Min nTPM: 41.5
RHH5201_R3572
84.1
RHH5229_R3601
41.5
RHH5258_R3630
82.1
RHH5287_R3659
72.3
Non-Vd2 gdTCR nTPM: 93.5
Samples: 4
Max nTPM: 114.9
Min nTPM: 82.7
RHH5235_R3607
88.4
RHH5264_R3636
114.9
RHH5207_R3578
82.7
RHH5299_R3665
88.0
T-reg nTPM: 76.3
Samples: 4
Max nTPM: 88.8
Min nTPM: 69.0
RHH5301_R3667
69.6
RHH5237_R3609
88.8
RHH5266_R3638
77.9
RHH5209_R3580
69.0
Terminal effector memory CD4 T-cell nTPM: 81.4
Samples: 2
Max nTPM: 87.6
Min nTPM: 75.1
RHH5243_R3615
87.6
RHH5272_R3644
75.1
Terminal effector memory CD8 T-cell nTPM: 84.6
Samples: 4
Max nTPM: 105.1
Min nTPM: 68.4
RHH5232_R3604
86.6
RHH5204_R3575
68.4
RHH5261_R3633
78.3
RHH5296_R3662
105.1
Vd2 gdTCR nTPM: 75.1
Samples: 4
Max nTPM: 81.6
Min nTPM: 64.9
RHH5234_R3606
73.7
RHH5206_R3577
81.6
RHH5263_R3635
80.1
RHH5298_R3664
64.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
