HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:15.7 nTPM
HPA Brain:107.8 nTPM
GTEx:15.7 nTPM
FANTOM5:68.2 Scaled Tags Per Million
Pig:190.5 nTPM
Mouse:63.7 nTPM
Allen mouse:12.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039089
Glial cells Not detected
Neuronal cells Medium

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 107.8
Sample id Sample description nTPM
Hippocampus
nTPM: 85.2
1898 Male, age 80, left hemisphere 111.3
1855 Male, age 76, left hemisphere 86.4
1911 Female, age 85, right hemisphere 85.3
2529 Female, age 94, left hemisphere 77.2
2621 Female, age 67, right hemisphere 77.1
2148 Female, age 91, left hemisphere 74.0
Dentate gyrus
nTPM: 86.1
1927 Female, age 91, both hemispheres 112.8
2246 Female, age 85, both hemispheres 87.7
2010 Male, age 76, both hemispheres 85.4
2528 Male, age 74, both hemispheres 81.2
2530 Female, age 94, left hemisphere 76.1
2531 Female, age 67, both hemispheres 73.4
Entorhinal gyrus
nTPM: 82.3
1938 Female, age 85, left hemisphere 105.7
1787 Male, age 76, left hemisphere 83.9
2764 Male, age 80, right hemisphere 83.9
2613 Female, age 94, left hemisphere 81.8
2686 Male, age 75, right hemisphere 71.4
2117 Female, age 91, right hemisphere 67.0
Hippocampus, CA1
nTPM: 103.5
2749 Male, age 80, left hemisphere 162.0
1873 Female, age 85, both hemispheres 108.5
2045 Male, age 76, both hemispheres 91.7
2527 Male, age 74, both hemispheres 82.2
2082 Female, age 91, right hemisphere 73.2
Hippocampus, CA2
nTPM: 89.1
1892 Male, age 76, both hemispheres 114.8
1963 Male, age 80, left hemisphere 111.0
1940 Female, age 85, left hemisphere 83.0
2249 Male, age 74, both hemispheres 80.9
2113 Female, age 91, right hemisphere 76.2
2437 Female, age 94, left hemisphere 68.7
Hippocampus, CA3
nTPM: 93.4
2137 Male, age 80, left hemisphere 155.3
1867 Male, age 76, both hemispheres 96.6
1891 Female, age 85, both hemispheres 86.1
2620 Female, age 94, left hemisphere 81.4
2436 Male, age 74, both hemispheres 76.2
2861 Female, age 67, both hemispheres 65.0
Parahippocampal cortex
nTPM: 84.0
1850 Male, age 80, both hemispheres 117.5
1933 Female, age 85, both hemispheres 96.3
1990 Female, age 91, right hemisphere 87.9
2245 Female, age 91, both hemispheres 87.1
2693 Female, age 94, both hemispheres 86.1
2250 Female, age 67, right hemisphere 85.7
2532 Female, age 72, left hemisphere 77.8
2018 Male, age 76, both hemispheres 74.8
2692 Male, age 74, both hemispheres 65.2
2622 Female, age 67, right hemisphere 61.6
Perirhinal gyrus
nTPM: 107.8
1847 Female, age 91, left hemisphere 117.2
1841 Female, age 85, right hemisphere 116.9
1794 Male, age 80, right hemisphere 113.2
2848 Male, age 76, right hemisphere 99.2
2521 Female, age 94, right hemisphere 92.5
Subiculum
nTPM: 78.3
1901 Male, age 80, both hemispheres 101.5
1977 Female, age 85, both hemispheres 91.7
2438 Female, age 94, left hemisphere 72.6
2729 Female, age 91, right hemisphere 70.8
2042 Male, age 76, both hemispheres 70.5
2619 Male, age 74, both hemispheres 62.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.7
Samples: 197

Max nTPM: 32.6
Min nTPM: 4.6
Std nTPM: 5.2
Median nTPM: 15.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 32.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 31.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 30.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 28.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 28.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 26.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 25.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 25.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 25.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 25.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 24.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.2
FF:10169-103B7 60 years, female 75.8
FF:10153-102I9 76 years, female 60.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 190.5
Pig sample Sample description nTPM
Subiculum
nTPM: 172.3
Samples: 4

Max nTPM: 220.0
Min nTPM: 139.6
Sample A Female 220.0
Sample B Female 155.4
Sample C Male 174.2
Sample D Male 139.6
Dorsal hippocampus
nTPM: 153.7
Samples: 4

Max nTPM: 166.9
Min nTPM: 127.3
Sample A Female 163.5
Sample B Female 166.9
Sample C Male 157.1
Sample D Male 127.3
Entorhinal cortex
nTPM: 190.4
Samples: 4

Max nTPM: 198.2
Min nTPM: 179.5
Sample A Female 187.0
Sample B Female 198.2
Sample C Male 197.0
Sample D Male 179.5
Ventral hippocampus
nTPM: 156.5
Samples: 4

Max nTPM: 185.3
Min nTPM: 126.9
Sample A Female 140.1
Sample B Female 126.9
Sample C Male 173.5
Sample D Male 185.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.7
Samples: 4

Max nTPM: 81.6
Min nTPM: 55.3
Sample A Male 57.4
Sample B Male 55.3
Sample C Female 60.4
Sample D Female 81.6
Hippocampal formation
nTPM: 62.7
Samples: 4

Max nTPM: 72.4
Min nTPM: 52.1
Sample A Male 56.2
Sample B Male 70.0
Sample C Female 72.4
Sample D Female 52.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.2
69526516 Antisense, RP_050421_01_A04, Mouse strain C57BL/6J (56 days, male) 12.2

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