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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
92.4
nTPM
Monaco:
246.5
nTPM
Schmiedel:
482.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
92.4
HPA sample
nTPM
gdT-cell nTPM: 66.4
Samples: 6
Max nTPM: 77.7
Min nTPM: 40.8
P10809_1007
40.8
P10809_1022
77.7
P10809_1041
76.7
P10809_1060
64.7
P10809_1077
71.6
P10809_1098
66.9
MAIT T-cell nTPM: 75.3
Samples: 6
Max nTPM: 93.0
Min nTPM: 59.8
P10809_1006
59.8
P10809_1024
86.6
P10809_1043
60.3
P10809_1062
78.0
P10809_1083
74.0
P10809_1097
93.0
Memory CD4 T-cell nTPM: 68.0
Samples: 6
Max nTPM: 73.7
Min nTPM: 52.4
P10809_1014
52.4
P10809_1026
63.3
P10809_1045
71.9
P10809_1064
73.6
P10809_1086
73.2
P10809_1113
73.7
Memory CD8 T-cell nTPM: 64.2
Samples: 5
Max nTPM: 77.0
Min nTPM: 48.5
P10809_1012
48.5
P10809_1027
53.0
P10809_1046
69.1
P10809_1065
73.3
P10809_1111
77.0
Naive CD4 T-cell nTPM: 66.0
Samples: 6
Max nTPM: 83.0
Min nTPM: 43.1
P10809_1015
43.1
P10809_1030
61.2
P10809_1049
83.0
P10809_1068
71.4
P10809_1085
74.0
P10809_1112
63.1
Naive CD8 T-cell nTPM: 70.1
Samples: 6
Max nTPM: 85.1
Min nTPM: 47.5
P10809_1016
47.5
P10809_1031
72.8
P10809_1050
76.9
P10809_1069
73.0
P10809_1087
85.1
P10809_1110
65.5
T-reg nTPM: 92.4
Samples: 6
Max nTPM: 105.3
Min nTPM: 60.0
P10809_1018
60.0
P10809_1037
96.5
P10809_1056
105.3
P10809_1075
100.0
P10809_1094
90.7
P10809_1106
101.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
246.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 187.6
Samples: 4
Max nTPM: 228.7
Min nTPM: 152.7
RHH5202_R3573
228.7
RHH5230_R3602
177.6
RHH5259_R3631
152.7
RHH5288_R3660
191.5
Effector memory CD8 T-cell nTPM: 246.5
Samples: 4
Max nTPM: 265.8
Min nTPM: 219.3
RHH5203_R3574
265.8
RHH5231_R3603
236.5
RHH5260_R3632
219.3
RHH5289_R3661
264.2
MAIT T-cell nTPM: 227.5
Samples: 4
Max nTPM: 258.1
Min nTPM: 190.0
RHH5233_R3605
258.1
RHH5205_R3576
240.9
RHH5262_R3634
220.8
RHH5297_R3663
190.0
Memory CD4 T-cell TFH nTPM: 207.7
Samples: 4
Max nTPM: 259.8
Min nTPM: 157.7
RHH5300_R3666
157.7
RHH5236_R3608
259.8
RHH5265_R3637
188.4
RHH5208_R3579
224.8
Memory CD4 T-cell Th1 nTPM: 179.1
Samples: 4
Max nTPM: 209.0
Min nTPM: 136.9
RHH5210_R3581
174.0
RHH5302_R3668
196.3
RHH5238_R3610
136.9
RHH5267_R3639
209.0
Memory CD4 T-cell Th1/Th17 nTPM: 187.1
Samples: 4
Max nTPM: 206.8
Min nTPM: 160.0
RHH5303_R3669
206.8
RHH5211_R3582
205.9
RHH5239_R3611
175.6
RHH5268_R3640
160.0
Memory CD4 T-cell Th17 nTPM: 208.5
Samples: 4
Max nTPM: 231.9
Min nTPM: 178.0
RHH5304_R3670
204.3
RHH5212_R3583
219.8
RHH5240_R3612
231.9
RHH5269_R3641
178.0
Memory CD4 T-cell Th2 nTPM: 203.5
Samples: 4
Max nTPM: 217.1
Min nTPM: 184.0
RHH5305_R3671
217.1
RHH5213_R3584
198.7
RHH5241_R3613
184.0
RHH5270_R3642
214.0
Naive CD4 T-cell nTPM: 167.2
Samples: 4
Max nTPM: 190.5
Min nTPM: 139.7
RHH5306_R3672
182.8
RHH5214_R3585
139.7
RHH5242_R3614
155.7
RHH5271_R3643
190.5
Naive CD8 T-cell nTPM: 184.3
Samples: 4
Max nTPM: 240.0
Min nTPM: 132.2
RHH5201_R3572
240.0
RHH5229_R3601
132.2
RHH5258_R3630
167.3
RHH5287_R3659
197.6
Non-Vd2 gdTCR nTPM: 219.8
Samples: 4
Max nTPM: 263.7
Min nTPM: 186.9
RHH5235_R3607
200.9
RHH5264_R3636
227.6
RHH5207_R3578
263.7
RHH5299_R3665
186.9
T-reg nTPM: 176.5
Samples: 4
Max nTPM: 194.1
Min nTPM: 161.6
RHH5301_R3667
179.1
RHH5237_R3609
194.1
RHH5266_R3638
171.3
RHH5209_R3580
161.6
Terminal effector memory CD4 T-cell nTPM: 225.6
Samples: 2
Max nTPM: 230.7
Min nTPM: 220.5
RHH5243_R3615
230.7
RHH5272_R3644
220.5
Terminal effector memory CD8 T-cell nTPM: 212.3
Samples: 4
Max nTPM: 254.3
Min nTPM: 192.6
RHH5232_R3604
254.3
RHH5204_R3575
192.6
RHH5261_R3633
201.4
RHH5296_R3662
200.7
Vd2 gdTCR nTPM: 203.5
Samples: 4
Max nTPM: 250.2
Min nTPM: 173.0
RHH5234_R3606
198.3
RHH5206_R3577
192.3
RHH5263_R3635
250.2
RHH5298_R3664
173.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
