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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
72.9
nTPM
Monaco:
193.2
nTPM
Schmiedel:
496.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
72.9
HPA sample
nTPM
gdT-cell nTPM: 72.9
Samples: 6
Max nTPM: 91.8
Min nTPM: 21.9
P10809_1007
88.1
P10809_1022
82.8
P10809_1041
83.3
P10809_1060
21.9
P10809_1077
69.5
P10809_1098
91.8
MAIT T-cell nTPM: 56.6
Samples: 6
Max nTPM: 107.7
Min nTPM: 14.3
P10809_1006
107.7
P10809_1024
14.3
P10809_1043
74.7
P10809_1062
24.9
P10809_1083
40.3
P10809_1097
77.9
Memory CD4 T-cell nTPM: 58.4
Samples: 6
Max nTPM: 86.9
Min nTPM: 17.6
P10809_1014
86.9
P10809_1026
67.3
P10809_1045
74.0
P10809_1064
68.8
P10809_1086
35.5
P10809_1113
17.6
Memory CD8 T-cell nTPM: 71.5
Samples: 5
Max nTPM: 105.9
Min nTPM: 43.8
P10809_1012
105.9
P10809_1027
43.8
P10809_1046
81.4
P10809_1065
53.3
P10809_1111
72.9
Naive CD4 T-cell nTPM: 60.2
Samples: 6
Max nTPM: 76.4
Min nTPM: 50.0
P10809_1015
76.4
P10809_1030
70.6
P10809_1049
54.1
P10809_1068
56.2
P10809_1085
50.0
P10809_1112
53.6
Naive CD8 T-cell nTPM: 60.6
Samples: 6
Max nTPM: 86.0
Min nTPM: 15.3
P10809_1016
86.0
P10809_1031
62.5
P10809_1050
63.3
P10809_1069
70.5
P10809_1087
15.3
P10809_1110
65.7
T-reg nTPM: 67.8
Samples: 6
Max nTPM: 89.2
Min nTPM: 15.6
P10809_1018
63.5
P10809_1037
89.2
P10809_1056
80.4
P10809_1075
76.0
P10809_1094
15.6
P10809_1106
82.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
193.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 104.2
Samples: 4
Max nTPM: 156.6
Min nTPM: 31.1
RHH5202_R3573
31.1
RHH5230_R3602
155.2
RHH5259_R3631
156.6
RHH5288_R3660
73.9
Effector memory CD8 T-cell nTPM: 103.9
Samples: 4
Max nTPM: 171.2
Min nTPM: 38.0
RHH5203_R3574
75.8
RHH5231_R3603
130.5
RHH5260_R3632
171.2
RHH5289_R3661
38.0
MAIT T-cell nTPM: 113.6
Samples: 4
Max nTPM: 182.4
Min nTPM: 60.8
RHH5233_R3605
60.8
RHH5205_R3576
144.2
RHH5262_R3634
182.4
RHH5297_R3663
66.9
Memory CD4 T-cell TFH nTPM: 122.7
Samples: 4
Max nTPM: 189.2
Min nTPM: 45.3
RHH5300_R3666
145.4
RHH5236_R3608
189.2
RHH5265_R3637
110.7
RHH5208_R3579
45.3
Memory CD4 T-cell Th1 nTPM: 132.4
Samples: 4
Max nTPM: 197.3
Min nTPM: 46.6
RHH5210_R3581
96.6
RHH5302_R3668
46.6
RHH5238_R3610
189.0
RHH5267_R3639
197.3
Memory CD4 T-cell Th1/Th17 nTPM: 132.2
Samples: 4
Max nTPM: 190.2
Min nTPM: 28.6
RHH5303_R3669
28.6
RHH5211_R3582
190.2
RHH5239_R3611
139.0
RHH5268_R3640
170.8
Memory CD4 T-cell Th17 nTPM: 122.0
Samples: 4
Max nTPM: 182.5
Min nTPM: 40.5
RHH5304_R3670
40.5
RHH5212_R3583
177.3
RHH5240_R3612
87.8
RHH5269_R3641
182.5
Memory CD4 T-cell Th2 nTPM: 148.7
Samples: 4
Max nTPM: 206.9
Min nTPM: 53.1
RHH5305_R3671
162.9
RHH5213_R3584
206.9
RHH5241_R3613
53.1
RHH5270_R3642
171.7
Naive CD4 T-cell nTPM: 168.0
Samples: 4
Max nTPM: 191.9
Min nTPM: 121.1
RHH5306_R3672
174.8
RHH5214_R3585
191.9
RHH5242_R3614
121.1
RHH5271_R3643
184.0
Naive CD8 T-cell nTPM: 129.9
Samples: 4
Max nTPM: 178.8
Min nTPM: 42.5
RHH5201_R3572
42.5
RHH5229_R3601
138.4
RHH5258_R3630
178.8
RHH5287_R3659
159.8
Non-Vd2 gdTCR nTPM: 115.6
Samples: 4
Max nTPM: 174.3
Min nTPM: 44.4
RHH5235_R3607
174.3
RHH5264_R3636
75.2
RHH5207_R3578
44.4
RHH5299_R3665
168.4
T-reg nTPM: 193.2
Samples: 4
Max nTPM: 216.9
Min nTPM: 164.2
RHH5301_R3667
164.2
RHH5237_R3609
216.9
RHH5266_R3638
198.0
RHH5209_R3580
193.8
Terminal effector memory CD4 T-cell nTPM: 127.2
Samples: 2
Max nTPM: 165.9
Min nTPM: 88.4
RHH5243_R3615
165.9
RHH5272_R3644
88.4
Terminal effector memory CD8 T-cell nTPM: 105.1
Samples: 4
Max nTPM: 183.5
Min nTPM: 40.6
RHH5232_R3604
90.3
RHH5204_R3575
105.9
RHH5261_R3633
183.5
RHH5296_R3662
40.6
Vd2 gdTCR nTPM: 139.3
Samples: 4
Max nTPM: 168.2
Min nTPM: 116.0
RHH5234_R3606
145.2
RHH5206_R3577
116.0
RHH5263_R3635
168.2
RHH5298_R3664
127.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
