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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
160.2
nTPM
Monaco:
80.3
nTPM
Schmiedel:
74.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
160.2
HPA sample
nTPM
gdT-cell nTPM: 84.7
Samples: 6
Max nTPM: 115.5
Min nTPM: 46.9
P10809_1007
46.9
P10809_1022
79.9
P10809_1041
115.5
P10809_1060
88.1
P10809_1077
90.2
P10809_1098
87.5
MAIT T-cell nTPM: 76.5
Samples: 6
Max nTPM: 127.9
Min nTPM: 45.5
P10809_1006
45.5
P10809_1024
127.9
P10809_1043
73.9
P10809_1062
89.0
P10809_1083
64.5
P10809_1097
58.4
Memory CD4 T-cell nTPM: 88.7
Samples: 6
Max nTPM: 104.4
Min nTPM: 56.6
P10809_1014
56.6
P10809_1026
100.6
P10809_1045
101.5
P10809_1064
84.2
P10809_1086
104.4
P10809_1113
84.6
Memory CD8 T-cell nTPM: 92.8
Samples: 5
Max nTPM: 109.4
Min nTPM: 57.6
P10809_1012
57.6
P10809_1027
101.3
P10809_1046
94.0
P10809_1065
109.4
P10809_1111
101.7
Naive CD4 T-cell nTPM: 101.8
Samples: 6
Max nTPM: 137.1
Min nTPM: 62.8
P10809_1015
62.8
P10809_1030
108.0
P10809_1049
137.1
P10809_1068
101.1
P10809_1085
117.3
P10809_1112
84.6
Naive CD8 T-cell nTPM: 93.5
Samples: 6
Max nTPM: 111.2
Min nTPM: 64.5
P10809_1016
64.5
P10809_1031
91.5
P10809_1050
101.1
P10809_1069
106.8
P10809_1087
111.2
P10809_1110
86.0
T-reg nTPM: 160.2
Samples: 6
Max nTPM: 187.6
Min nTPM: 109.7
P10809_1018
109.7
P10809_1037
166.2
P10809_1056
167.5
P10809_1075
187.6
P10809_1094
153.8
P10809_1106
176.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
80.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 51.8
Samples: 4
Max nTPM: 65.8
Min nTPM: 37.0
RHH5202_R3573
65.8
RHH5230_R3602
43.2
RHH5259_R3631
37.0
RHH5288_R3660
61.3
Effector memory CD8 T-cell nTPM: 56.0
Samples: 4
Max nTPM: 74.6
Min nTPM: 32.9
RHH5203_R3574
74.6
RHH5231_R3603
49.8
RHH5260_R3632
32.9
RHH5289_R3661
66.7
MAIT T-cell nTPM: 46.7
Samples: 4
Max nTPM: 59.4
Min nTPM: 31.7
RHH5233_R3605
46.9
RHH5205_R3576
31.7
RHH5262_R3634
48.7
RHH5297_R3663
59.4
Memory CD4 T-cell TFH nTPM: 73.9
Samples: 4
Max nTPM: 86.9
Min nTPM: 52.5
RHH5300_R3666
77.4
RHH5236_R3608
78.8
RHH5265_R3637
86.9
RHH5208_R3579
52.5
Memory CD4 T-cell Th1 nTPM: 53.2
Samples: 4
Max nTPM: 63.7
Min nTPM: 46.4
RHH5210_R3581
52.9
RHH5302_R3668
63.7
RHH5238_R3610
46.4
RHH5267_R3639
49.6
Memory CD4 T-cell Th1/Th17 nTPM: 59.1
Samples: 4
Max nTPM: 86.3
Min nTPM: 33.3
RHH5303_R3669
68.6
RHH5211_R3582
86.3
RHH5239_R3611
33.3
RHH5268_R3640
48.3
Memory CD4 T-cell Th17 nTPM: 45.5
Samples: 4
Max nTPM: 55.9
Min nTPM: 34.4
RHH5304_R3670
39.2
RHH5212_R3583
52.5
RHH5240_R3612
55.9
RHH5269_R3641
34.4
Memory CD4 T-cell Th2 nTPM: 64.9
Samples: 4
Max nTPM: 76.1
Min nTPM: 51.7
RHH5305_R3671
64.8
RHH5213_R3584
67.0
RHH5241_R3613
76.1
RHH5270_R3642
51.7
Naive CD4 T-cell nTPM: 50.1
Samples: 4
Max nTPM: 55.2
Min nTPM: 40.7
RHH5306_R3672
51.1
RHH5214_R3585
55.2
RHH5242_R3614
40.7
RHH5271_R3643
53.3
Naive CD8 T-cell nTPM: 65.7
Samples: 4
Max nTPM: 81.2
Min nTPM: 50.1
RHH5201_R3572
53.1
RHH5229_R3601
50.1
RHH5258_R3630
81.2
RHH5287_R3659
78.3
Non-Vd2 gdTCR nTPM: 54.7
Samples: 4
Max nTPM: 68.0
Min nTPM: 42.7
RHH5235_R3607
42.7
RHH5264_R3636
68.0
RHH5207_R3578
53.6
RHH5299_R3665
54.6
T-reg nTPM: 80.3
Samples: 4
Max nTPM: 103.8
Min nTPM: 59.2
RHH5301_R3667
95.4
RHH5237_R3609
103.8
RHH5266_R3638
62.8
RHH5209_R3580
59.2
Terminal effector memory CD4 T-cell nTPM: 55.1
Samples: 2
Max nTPM: 65.9
Min nTPM: 44.3
RHH5243_R3615
44.3
RHH5272_R3644
65.9
Terminal effector memory CD8 T-cell nTPM: 54.1
Samples: 4
Max nTPM: 62.2
Min nTPM: 42.6
RHH5232_R3604
62.2
RHH5204_R3575
54.3
RHH5261_R3633
42.6
RHH5296_R3662
57.1
Vd2 gdTCR nTPM: 52.5
Samples: 4
Max nTPM: 57.6
Min nTPM: 44.7
RHH5234_R3606
50.5
RHH5206_R3577
57.6
RHH5263_R3635
44.7
RHH5298_R3664
57.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
