HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:63.7 nTPM
HPA Brain:82.2 nTPM
GTEx:63.7 nTPM
FANTOM5:76.5 Scaled Tags Per Million
Pig:4.8 nTPM
Mouse:77.7 nTPM
Allen mouse:11.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018845Antibody HPA056875
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.2
Sample id Sample description nTPM
Hippocampus
nTPM: 64.1
1898 Male, age 80, left hemisphere 97.7
2621 Female, age 67, right hemisphere 88.3
1855 Male, age 76, left hemisphere 73.4
1911 Female, age 85, right hemisphere 48.7
2148 Female, age 91, left hemisphere 45.9
2529 Female, age 94, left hemisphere 30.5
Dentate gyrus
nTPM: 60.2
2010 Male, age 76, both hemispheres 96.7
1927 Female, age 91, both hemispheres 74.2
2530 Female, age 94, left hemisphere 67.8
2246 Female, age 85, both hemispheres 51.5
2528 Male, age 74, both hemispheres 36.6
2531 Female, age 67, both hemispheres 34.3
Entorhinal gyrus
nTPM: 33.0
1938 Female, age 85, left hemisphere 39.2
2613 Female, age 94, left hemisphere 39.1
2764 Male, age 80, right hemisphere 37.6
1787 Male, age 76, left hemisphere 31.6
2117 Female, age 91, right hemisphere 26.0
2686 Male, age 75, right hemisphere 24.5
Hippocampus, CA1
nTPM: 82.2
2749 Male, age 80, left hemisphere 183.8
1873 Female, age 85, both hemispheres 92.9
2527 Male, age 74, both hemispheres 57.9
2082 Female, age 91, right hemisphere 43.6
2045 Male, age 76, both hemispheres 32.8
Hippocampus, CA2
nTPM: 61.7
1963 Male, age 80, left hemisphere 124.4
1892 Male, age 76, both hemispheres 86.2
2249 Male, age 74, both hemispheres 43.9
2113 Female, age 91, right hemisphere 40.3
2437 Female, age 94, left hemisphere 37.8
1940 Female, age 85, left hemisphere 37.4
Hippocampus, CA3
nTPM: 61.2
2137 Male, age 80, left hemisphere 121.6
2436 Male, age 74, both hemispheres 55.8
1867 Male, age 76, both hemispheres 55.5
2861 Female, age 67, both hemispheres 55.0
2620 Female, age 94, left hemisphere 44.7
1891 Female, age 85, both hemispheres 34.8
Parahippocampal cortex
nTPM: 36.0
2245 Female, age 91, both hemispheres 53.2
1850 Male, age 80, both hemispheres 41.4
2018 Male, age 76, both hemispheres 40.5
1933 Female, age 85, both hemispheres 39.0
2250 Female, age 67, right hemisphere 36.5
1990 Female, age 91, right hemisphere 33.0
2692 Male, age 74, both hemispheres 29.7
2622 Female, age 67, right hemisphere 29.6
2693 Female, age 94, both hemispheres 29.6
2532 Female, age 72, left hemisphere 27.7
Perirhinal gyrus
nTPM: 39.5
1847 Female, age 91, left hemisphere 57.0
1794 Male, age 80, right hemisphere 42.2
2521 Female, age 94, right hemisphere 38.6
1841 Female, age 85, right hemisphere 32.2
2848 Male, age 76, right hemisphere 27.5
Subiculum
nTPM: 38.0
1901 Male, age 80, both hemispheres 63.9
2042 Male, age 76, both hemispheres 46.4
2438 Female, age 94, left hemisphere 34.7
1977 Female, age 85, both hemispheres 32.2
2729 Female, age 91, right hemisphere 26.9
2619 Male, age 74, both hemispheres 24.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.7
Samples: 197

Max nTPM: 283.2
Min nTPM: 10.7
Std nTPM: 50.8
Median nTPM: 44.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 283.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 234.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 220.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 217.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 188.5
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 175.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 172.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 165.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 165.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 164.4
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 164.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.5
FF:10169-103B7 60 years, female 126.7
FF:10153-102I9 76 years, female 26.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.8
Pig sample Sample description nTPM
Subiculum
nTPM: 4.2
Samples: 4

Max nTPM: 4.6
Min nTPM: 3.9
Sample A Female 4.6
Sample B Female 4.5
Sample C Male 3.9
Sample D Male 3.9
Dorsal hippocampus
nTPM: 4.3
Samples: 4

Max nTPM: 5.3
Min nTPM: 3.6
Sample A Female 5.3
Sample B Female 4.6
Sample C Male 3.6
Sample D Male 3.7
Entorhinal cortex
nTPM: 3.2
Samples: 4

Max nTPM: 4.1
Min nTPM: 2.7
Sample A Female 2.9
Sample B Female 2.9
Sample C Male 4.1
Sample D Male 2.7
Ventral hippocampus
nTPM: 4.8
Samples: 4

Max nTPM: 5.7
Min nTPM: 4.0
Sample A Female 5.0
Sample B Female 4.0
Sample C Male 5.7
Sample D Male 4.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 77.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 54.3
Samples: 4

Max nTPM: 56.7
Min nTPM: 50.8
Sample A Male 54.3
Sample B Male 50.8
Sample C Female 55.2
Sample D Female 56.7
Hippocampal formation
nTPM: 77.8
Samples: 4

Max nTPM: 89.9
Min nTPM: 68.5
Sample A Male 72.9
Sample B Male 79.7
Sample C Female 89.9
Sample D Female 68.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.6
532647 Antisense, RP_040825_01_A02, Mouse strain C57BL/6J (56 days, male) 13.2
75042253 Antisense, RP_060412_02_C07, Mouse strain C57BL/6J (56 days, male) 10.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org