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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
482.7
nTPM
Monaco:
1149.6
nTPM
Schmiedel:
1689.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
482.7
HPA sample
nTPM
gdT-cell nTPM: 220.0
Samples: 6
Max nTPM: 286.5
Min nTPM: 163.4
P10809_1007
214.2
P10809_1022
219.7
P10809_1041
286.5
P10809_1060
163.4
P10809_1077
257.1
P10809_1098
179.0
MAIT T-cell nTPM: 279.2
Samples: 6
Max nTPM: 298.2
Min nTPM: 245.9
P10809_1006
294.8
P10809_1024
281.1
P10809_1043
273.4
P10809_1062
245.9
P10809_1083
298.2
P10809_1097
282.0
Memory CD4 T-cell nTPM: 358.1
Samples: 6
Max nTPM: 433.2
Min nTPM: 262.1
P10809_1014
433.2
P10809_1026
399.2
P10809_1045
380.9
P10809_1064
297.6
P10809_1086
262.1
P10809_1113
375.3
Memory CD8 T-cell nTPM: 284.9
Samples: 5
Max nTPM: 387.5
Min nTPM: 203.1
P10809_1012
387.5
P10809_1027
295.2
P10809_1046
277.4
P10809_1065
203.1
P10809_1111
261.5
Naive CD4 T-cell nTPM: 217.7
Samples: 6
Max nTPM: 262.9
Min nTPM: 190.6
P10809_1015
262.9
P10809_1030
247.3
P10809_1049
209.8
P10809_1068
190.9
P10809_1085
190.6
P10809_1112
204.5
Naive CD8 T-cell nTPM: 217.9
Samples: 6
Max nTPM: 268.2
Min nTPM: 166.5
P10809_1016
262.3
P10809_1031
268.2
P10809_1050
209.7
P10809_1069
212.8
P10809_1087
187.9
P10809_1110
166.5
T-reg nTPM: 482.7
Samples: 6
Max nTPM: 573.2
Min nTPM: 422.3
P10809_1018
573.2
P10809_1037
491.0
P10809_1056
485.6
P10809_1075
429.8
P10809_1094
422.3
P10809_1106
494.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1149.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 719.9
Samples: 4
Max nTPM: 866.8
Min nTPM: 523.3
RHH5202_R3573
705.9
RHH5230_R3602
866.8
RHH5259_R3631
523.3
RHH5288_R3660
783.5
Effector memory CD8 T-cell nTPM: 598.2
Samples: 4
Max nTPM: 704.4
Min nTPM: 486.4
RHH5203_R3574
624.8
RHH5231_R3603
577.1
RHH5260_R3632
486.4
RHH5289_R3661
704.4
MAIT T-cell nTPM: 633.6
Samples: 4
Max nTPM: 773.3
Min nTPM: 514.3
RHH5233_R3605
773.3
RHH5205_R3576
614.3
RHH5262_R3634
632.5
RHH5297_R3663
514.3
Memory CD4 T-cell TFH nTPM: 693.2
Samples: 4
Max nTPM: 768.5
Min nTPM: 516.3
RHH5300_R3666
749.8
RHH5236_R3608
516.3
RHH5265_R3637
768.5
RHH5208_R3579
738.3
Memory CD4 T-cell Th1 nTPM: 696.2
Samples: 4
Max nTPM: 815.0
Min nTPM: 595.7
RHH5210_R3581
595.7
RHH5302_R3668
815.0
RHH5238_R3610
652.8
RHH5267_R3639
721.4
Memory CD4 T-cell Th1/Th17 nTPM: 801.3
Samples: 4
Max nTPM: 903.7
Min nTPM: 624.4
RHH5303_R3669
865.7
RHH5211_R3582
903.7
RHH5239_R3611
624.4
RHH5268_R3640
811.5
Memory CD4 T-cell Th17 nTPM: 1149.6
Samples: 4
Max nTPM: 1272.8
Min nTPM: 1065.3
RHH5304_R3670
1097.3
RHH5212_R3583
1163.1
RHH5240_R3612
1272.8
RHH5269_R3641
1065.3
Memory CD4 T-cell Th2 nTPM: 1126.1
Samples: 4
Max nTPM: 1403.9
Min nTPM: 1011.8
RHH5305_R3671
1011.8
RHH5213_R3584
1046.5
RHH5241_R3613
1403.9
RHH5270_R3642
1042.2
Naive CD4 T-cell nTPM: 563.7
Samples: 4
Max nTPM: 689.1
Min nTPM: 340.4
RHH5306_R3672
617.9
RHH5214_R3585
340.4
RHH5242_R3614
689.1
RHH5271_R3643
607.5
Naive CD8 T-cell nTPM: 516.3
Samples: 4
Max nTPM: 613.5
Min nTPM: 381.6
RHH5201_R3572
522.7
RHH5229_R3601
381.6
RHH5258_R3630
613.5
RHH5287_R3659
547.4
Non-Vd2 gdTCR nTPM: 564.0
Samples: 4
Max nTPM: 640.8
Min nTPM: 462.5
RHH5235_R3607
640.8
RHH5264_R3636
462.5
RHH5207_R3578
558.0
RHH5299_R3665
594.5
T-reg nTPM: 621.1
Samples: 4
Max nTPM: 747.9
Min nTPM: 475.8
RHH5301_R3667
747.9
RHH5237_R3609
547.7
RHH5266_R3638
712.9
RHH5209_R3580
475.8
Terminal effector memory CD4 T-cell nTPM: 743.0
Samples: 2
Max nTPM: 896.8
Min nTPM: 589.1
RHH5243_R3615
896.8
RHH5272_R3644
589.1
Terminal effector memory CD8 T-cell nTPM: 571.1
Samples: 4
Max nTPM: 662.9
Min nTPM: 477.0
RHH5232_R3604
618.2
RHH5204_R3575
477.0
RHH5261_R3633
526.2
RHH5296_R3662
662.9
Vd2 gdTCR nTPM: 462.3
Samples: 4
Max nTPM: 632.5
Min nTPM: 377.9
RHH5234_R3606
632.5
RHH5206_R3577
433.6
RHH5263_R3635
377.9
RHH5298_R3664
405.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
