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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
154.7
nTPM
Monaco:
450.2
nTPM
Schmiedel:
128.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
154.7
HPA sample
nTPM
gdT-cell nTPM: 28.0
Samples: 6
Max nTPM: 61.0
Min nTPM: 11.9
P10809_1007
61.0
P10809_1022
19.1
P10809_1041
34.2
P10809_1060
11.9
P10809_1077
20.1
P10809_1098
21.4
MAIT T-cell nTPM: 51.7
Samples: 6
Max nTPM: 95.6
Min nTPM: 18.9
P10809_1006
61.0
P10809_1024
18.9
P10809_1043
75.9
P10809_1062
25.9
P10809_1083
32.9
P10809_1097
95.6
Memory CD4 T-cell nTPM: 154.8
Samples: 6
Max nTPM: 398.4
Min nTPM: 38.8
P10809_1014
206.7
P10809_1026
98.1
P10809_1045
398.4
P10809_1064
146.8
P10809_1086
39.7
P10809_1113
38.8
Memory CD8 T-cell nTPM: 69.8
Samples: 5
Max nTPM: 141.6
Min nTPM: 25.1
P10809_1012
86.7
P10809_1027
25.1
P10809_1046
141.6
P10809_1065
57.9
P10809_1111
37.9
Naive CD4 T-cell nTPM: 124.6
Samples: 6
Max nTPM: 387.8
Min nTPM: 21.6
P10809_1015
144.3
P10809_1030
45.0
P10809_1049
387.8
P10809_1068
107.8
P10809_1085
40.8
P10809_1112
21.6
Naive CD8 T-cell nTPM: 39.9
Samples: 6
Max nTPM: 78.2
Min nTPM: 16.2
P10809_1016
40.4
P10809_1031
24.6
P10809_1050
78.2
P10809_1069
53.6
P10809_1087
16.2
P10809_1110
26.1
T-reg nTPM: 87.6
Samples: 6
Max nTPM: 212.3
Min nTPM: 46.1
P10809_1018
46.1
P10809_1037
87.3
P10809_1056
212.3
P10809_1075
74.4
P10809_1094
48.5
P10809_1106
56.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
450.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 113.1
Samples: 4
Max nTPM: 134.9
Min nTPM: 93.9
RHH5202_R3573
93.9
RHH5230_R3602
134.9
RHH5259_R3631
124.7
RHH5288_R3660
98.8
Effector memory CD8 T-cell nTPM: 117.4
Samples: 4
Max nTPM: 190.5
Min nTPM: 34.2
RHH5203_R3574
100.5
RHH5231_R3603
190.5
RHH5260_R3632
144.2
RHH5289_R3661
34.2
MAIT T-cell nTPM: 134.3
Samples: 4
Max nTPM: 213.3
Min nTPM: 90.7
RHH5233_R3605
107.7
RHH5205_R3576
90.7
RHH5262_R3634
213.3
RHH5297_R3663
125.4
Memory CD4 T-cell TFH nTPM: 450.2
Samples: 4
Max nTPM: 822.4
Min nTPM: 215.6
RHH5300_R3666
465.8
RHH5236_R3608
822.4
RHH5265_R3637
296.9
RHH5208_R3579
215.6
Memory CD4 T-cell Th1 nTPM: 212.6
Samples: 4
Max nTPM: 246.7
Min nTPM: 186.8
RHH5210_R3581
219.4
RHH5302_R3668
197.5
RHH5238_R3610
186.8
RHH5267_R3639
246.7
Memory CD4 T-cell Th1/Th17 nTPM: 265.0
Samples: 4
Max nTPM: 534.1
Min nTPM: 118.8
RHH5303_R3669
130.9
RHH5211_R3582
534.1
RHH5239_R3611
118.8
RHH5268_R3640
276.3
Memory CD4 T-cell Th17 nTPM: 307.6
Samples: 4
Max nTPM: 696.5
Min nTPM: 113.8
RHH5304_R3670
120.7
RHH5212_R3583
696.5
RHH5240_R3612
113.8
RHH5269_R3641
299.2
Memory CD4 T-cell Th2 nTPM: 297.2
Samples: 4
Max nTPM: 430.8
Min nTPM: 145.0
RHH5305_R3671
216.3
RHH5213_R3584
430.8
RHH5241_R3613
145.0
RHH5270_R3642
396.7
Naive CD4 T-cell nTPM: 337.2
Samples: 4
Max nTPM: 678.3
Min nTPM: 123.0
RHH5306_R3672
339.5
RHH5214_R3585
678.3
RHH5242_R3614
123.0
RHH5271_R3643
208.1
Naive CD8 T-cell nTPM: 89.6
Samples: 4
Max nTPM: 116.9
Min nTPM: 60.7
RHH5201_R3572
68.8
RHH5229_R3601
60.7
RHH5258_R3630
116.9
RHH5287_R3659
112.1
Non-Vd2 gdTCR nTPM: 69.9
Samples: 4
Max nTPM: 102.2
Min nTPM: 41.1
RHH5235_R3607
86.4
RHH5264_R3636
41.1
RHH5207_R3578
49.8
RHH5299_R3665
102.2
T-reg nTPM: 290.2
Samples: 4
Max nTPM: 400.8
Min nTPM: 199.1
RHH5301_R3667
245.7
RHH5237_R3609
400.8
RHH5266_R3638
199.1
RHH5209_R3580
315.2
Terminal effector memory CD4 T-cell nTPM: 111.7
Samples: 2
Max nTPM: 137.5
Min nTPM: 85.8
RHH5243_R3615
85.8
RHH5272_R3644
137.5
Terminal effector memory CD8 T-cell nTPM: 87.3
Samples: 4
Max nTPM: 125.0
Min nTPM: 46.0
RHH5232_R3604
82.8
RHH5204_R3575
125.0
RHH5261_R3633
95.2
RHH5296_R3662
46.0
Vd2 gdTCR nTPM: 112.3
Samples: 4
Max nTPM: 126.6
Min nTPM: 97.6
RHH5234_R3606
117.1
RHH5206_R3577
97.6
RHH5263_R3635
107.7
RHH5298_R3664
126.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
