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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
310.4
nTPM
Monaco:
1438.8
nTPM
Schmiedel:
1819.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
310.4
HPA sample
nTPM
gdT-cell nTPM: 140.9
Samples: 6
Max nTPM: 174.2
Min nTPM: 116.5
P10809_1007
141.7
P10809_1022
174.2
P10809_1041
169.9
P10809_1060
118.7
P10809_1077
116.5
P10809_1098
124.1
MAIT T-cell nTPM: 196.8
Samples: 6
Max nTPM: 247.3
Min nTPM: 143.9
P10809_1006
247.3
P10809_1024
219.1
P10809_1043
233.0
P10809_1062
192.8
P10809_1083
144.6
P10809_1097
143.9
Memory CD4 T-cell nTPM: 210.7
Samples: 6
Max nTPM: 288.8
Min nTPM: 146.8
P10809_1014
259.6
P10809_1026
216.7
P10809_1045
288.8
P10809_1064
166.8
P10809_1086
146.8
P10809_1113
185.2
Memory CD8 T-cell nTPM: 186.4
Samples: 5
Max nTPM: 227.9
Min nTPM: 168.7
P10809_1012
227.9
P10809_1027
174.1
P10809_1046
189.9
P10809_1065
168.7
P10809_1111
171.2
Naive CD4 T-cell nTPM: 180.1
Samples: 6
Max nTPM: 237.7
Min nTPM: 135.9
P10809_1015
237.7
P10809_1030
199.3
P10809_1049
169.7
P10809_1068
189.4
P10809_1085
135.9
P10809_1112
148.8
Naive CD8 T-cell nTPM: 154.1
Samples: 6
Max nTPM: 220.3
Min nTPM: 102.9
P10809_1016
220.3
P10809_1031
191.1
P10809_1050
141.4
P10809_1069
133.0
P10809_1087
102.9
P10809_1110
135.8
T-reg nTPM: 310.4
Samples: 6
Max nTPM: 358.4
Min nTPM: 292.9
P10809_1018
310.9
P10809_1037
358.4
P10809_1056
309.1
P10809_1075
292.9
P10809_1094
297.3
P10809_1106
294.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1438.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1177.8
Samples: 4
Max nTPM: 1236.8
Min nTPM: 1073.9
RHH5202_R3573
1236.8
RHH5230_R3602
1073.9
RHH5259_R3631
1225.2
RHH5288_R3660
1175.2
Effector memory CD8 T-cell nTPM: 990.6
Samples: 4
Max nTPM: 1106.4
Min nTPM: 855.4
RHH5203_R3574
995.6
RHH5231_R3603
855.4
RHH5260_R3632
1005.1
RHH5289_R3661
1106.4
MAIT T-cell nTPM: 1071.2
Samples: 4
Max nTPM: 1287.2
Min nTPM: 870.2
RHH5233_R3605
1031.2
RHH5205_R3576
1287.2
RHH5262_R3634
870.2
RHH5297_R3663
1096.1
Memory CD4 T-cell TFH nTPM: 1205.1
Samples: 4
Max nTPM: 1306.3
Min nTPM: 938.6
RHH5300_R3666
1283.7
RHH5236_R3608
938.6
RHH5265_R3637
1291.6
RHH5208_R3579
1306.3
Memory CD4 T-cell Th1 nTPM: 1287.6
Samples: 4
Max nTPM: 1429.0
Min nTPM: 1060.8
RHH5210_R3581
1409.5
RHH5302_R3668
1251.0
RHH5238_R3610
1429.0
RHH5267_R3639
1060.8
Memory CD4 T-cell Th1/Th17 nTPM: 1366.2
Samples: 4
Max nTPM: 1839.4
Min nTPM: 1145.5
RHH5303_R3669
1271.8
RHH5211_R3582
1208.0
RHH5239_R3611
1839.4
RHH5268_R3640
1145.5
Memory CD4 T-cell Th17 nTPM: 1399.1
Samples: 4
Max nTPM: 1577.2
Min nTPM: 1217.9
RHH5304_R3670
1444.2
RHH5212_R3583
1217.9
RHH5240_R3612
1577.2
RHH5269_R3641
1357.0
Memory CD4 T-cell Th2 nTPM: 1438.9
Samples: 4
Max nTPM: 1613.2
Min nTPM: 1264.2
RHH5305_R3671
1542.4
RHH5213_R3584
1335.6
RHH5241_R3613
1613.2
RHH5270_R3642
1264.2
Naive CD4 T-cell nTPM: 1128.2
Samples: 4
Max nTPM: 1310.4
Min nTPM: 961.0
RHH5306_R3672
1184.6
RHH5214_R3585
961.0
RHH5242_R3614
1310.4
RHH5271_R3643
1056.6
Naive CD8 T-cell nTPM: 1097.4
Samples: 4
Max nTPM: 1201.0
Min nTPM: 975.1
RHH5201_R3572
1015.7
RHH5229_R3601
1197.7
RHH5258_R3630
975.1
RHH5287_R3659
1201.0
Non-Vd2 gdTCR nTPM: 727.0
Samples: 4
Max nTPM: 822.3
Min nTPM: 630.8
RHH5235_R3607
737.9
RHH5264_R3636
716.8
RHH5207_R3578
822.3
RHH5299_R3665
630.8
T-reg nTPM: 1161.9
Samples: 4
Max nTPM: 1305.8
Min nTPM: 975.2
RHH5301_R3667
1235.1
RHH5237_R3609
975.2
RHH5266_R3638
1131.4
RHH5209_R3580
1305.8
Terminal effector memory CD4 T-cell nTPM: 1023.1
Samples: 2
Max nTPM: 1033.7
Min nTPM: 1012.5
RHH5243_R3615
1012.5
RHH5272_R3644
1033.7
Terminal effector memory CD8 T-cell nTPM: 799.5
Samples: 4
Max nTPM: 1010.3
Min nTPM: 534.0
RHH5232_R3604
841.8
RHH5204_R3575
534.0
RHH5261_R3633
811.9
RHH5296_R3662
1010.3
Vd2 gdTCR nTPM: 1030.4
Samples: 4
Max nTPM: 1155.8
Min nTPM: 818.1
RHH5234_R3606
1131.3
RHH5206_R3577
818.1
RHH5263_R3635
1155.8
RHH5298_R3664
1016.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.