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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
100.6
nTPM
Monaco:
564.4
nTPM
Schmiedel:
73.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
100.6
HPA sample
nTPM
gdT-cell nTPM: 100.6
Samples: 6
Max nTPM: 121.4
Min nTPM: 75.9
P10809_1007
121.4
P10809_1022
119.0
P10809_1041
116.4
P10809_1060
79.9
P10809_1077
91.2
P10809_1098
75.9
MAIT T-cell nTPM: 77.4
Samples: 6
Max nTPM: 114.5
Min nTPM: 58.0
P10809_1006
95.2
P10809_1024
114.5
P10809_1043
71.5
P10809_1062
64.2
P10809_1083
61.2
P10809_1097
58.0
Memory CD4 T-cell nTPM: 10.2
Samples: 6
Max nTPM: 27.7
Min nTPM: 1.1
P10809_1014
2.8
P10809_1026
3.0
P10809_1045
5.5
P10809_1064
20.9
P10809_1086
27.7
P10809_1113
1.1
Memory CD8 T-cell nTPM: 68.9
Samples: 5
Max nTPM: 77.2
Min nTPM: 60.8
P10809_1012
69.9
P10809_1027
60.8
P10809_1046
74.8
P10809_1065
77.2
P10809_1111
61.9
Naive CD4 T-cell nTPM: 3.0
Samples: 6
Max nTPM: 12.9
Min nTPM: 0.0
P10809_1015
0.9
P10809_1030
0.0
P10809_1049
1.2
P10809_1068
3.0
P10809_1085
12.9
P10809_1112
0.2
Naive CD8 T-cell nTPM: 40.2
Samples: 6
Max nTPM: 83.2
Min nTPM: 12.3
P10809_1016
12.3
P10809_1031
30.6
P10809_1050
46.9
P10809_1069
54.0
P10809_1087
83.2
P10809_1110
14.0
T-reg nTPM: 0.1
Samples: 6
Max nTPM: 0.2
Min nTPM: 0.0
P10809_1018
0.0
P10809_1037
0.0
P10809_1056
0.0
P10809_1075
0.2
P10809_1094
0.0
P10809_1106
0.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
564.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 126.5
Samples: 4
Max nTPM: 145.1
Min nTPM: 102.4
RHH5202_R3573
102.4
RHH5230_R3602
145.1
RHH5259_R3631
132.8
RHH5288_R3660
125.8
Effector memory CD8 T-cell nTPM: 431.6
Samples: 4
Max nTPM: 552.2
Min nTPM: 372.7
RHH5203_R3574
552.2
RHH5231_R3603
372.7
RHH5260_R3632
393.3
RHH5289_R3661
408.1
MAIT T-cell nTPM: 415.5
Samples: 4
Max nTPM: 447.2
Min nTPM: 395.7
RHH5233_R3605
447.2
RHH5205_R3576
405.4
RHH5262_R3634
395.7
RHH5297_R3663
413.5
Memory CD4 T-cell TFH nTPM: 14.7
Samples: 4
Max nTPM: 17.6
Min nTPM: 12.1
RHH5300_R3666
12.1
RHH5236_R3608
17.6
RHH5265_R3637
12.4
RHH5208_R3579
16.6
Memory CD4 T-cell Th1 nTPM: 38.4
Samples: 4
Max nTPM: 57.5
Min nTPM: 12.4
RHH5210_R3581
57.5
RHH5302_R3668
12.4
RHH5238_R3610
49.0
RHH5267_R3639
34.8
Memory CD4 T-cell Th1/Th17 nTPM: 39.6
Samples: 4
Max nTPM: 54.1
Min nTPM: 31.5
RHH5303_R3669
39.6
RHH5211_R3582
33.0
RHH5239_R3611
54.1
RHH5268_R3640
31.5
Memory CD4 T-cell Th17 nTPM: 28.0
Samples: 4
Max nTPM: 65.4
Min nTPM: 8.7
RHH5304_R3670
65.4
RHH5212_R3583
8.7
RHH5240_R3612
22.5
RHH5269_R3641
15.4
Memory CD4 T-cell Th2 nTPM: 8.5
Samples: 4
Max nTPM: 10.7
Min nTPM: 7.1
RHH5305_R3671
8.4
RHH5213_R3584
10.7
RHH5241_R3613
7.1
RHH5270_R3642
7.7
Naive CD4 T-cell nTPM: 13.7
Samples: 4
Max nTPM: 27.5
Min nTPM: 2.2
RHH5306_R3672
8.8
RHH5214_R3585
16.2
RHH5242_R3614
27.5
RHH5271_R3643
2.2
Naive CD8 T-cell nTPM: 4.0
Samples: 4
Max nTPM: 12.2
Min nTPM: 0.4
RHH5201_R3572
2.4
RHH5229_R3601
12.2
RHH5258_R3630
0.8
RHH5287_R3659
0.4
Non-Vd2 gdTCR nTPM: 532.7
Samples: 4
Max nTPM: 555.9
Min nTPM: 501.3
RHH5235_R3607
524.2
RHH5264_R3636
501.3
RHH5207_R3578
549.5
RHH5299_R3665
555.9
T-reg nTPM: 8.9
Samples: 4
Max nTPM: 12.6
Min nTPM: 6.6
RHH5301_R3667
9.5
RHH5237_R3609
6.6
RHH5266_R3638
6.8
RHH5209_R3580
12.6
Terminal effector memory CD4 T-cell nTPM: 336.5
Samples: 2
Max nTPM: 374.6
Min nTPM: 298.4
RHH5243_R3615
374.6
RHH5272_R3644
298.4
Terminal effector memory CD8 T-cell nTPM: 564.5
Samples: 4
Max nTPM: 591.2
Min nTPM: 550.1
RHH5232_R3604
559.6
RHH5204_R3575
550.1
RHH5261_R3633
556.9
RHH5296_R3662
591.2
Vd2 gdTCR nTPM: 507.1
Samples: 4
Max nTPM: 550.4
Min nTPM: 449.1
RHH5234_R3606
550.4
RHH5206_R3577
545.6
RHH5263_R3635
483.1
RHH5298_R3664
449.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
