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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
44.8
nTPM
Monaco:
282.4
nTPM
Schmiedel:
452.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.8
HPA sample
nTPM
gdT-cell nTPM: 44.8
Samples: 6
Max nTPM: 54.6
Min nTPM: 32.1
P10809_1007
54.6
P10809_1022
45.7
P10809_1041
32.1
P10809_1060
46.2
P10809_1077
41.6
P10809_1098
48.6
MAIT T-cell nTPM: 40.5
Samples: 6
Max nTPM: 51.3
Min nTPM: 32.5
P10809_1006
51.3
P10809_1024
43.9
P10809_1043
32.5
P10809_1062
39.0
P10809_1083
33.5
P10809_1097
42.6
Memory CD4 T-cell nTPM: 27.9
Samples: 6
Max nTPM: 35.8
Min nTPM: 17.2
P10809_1014
33.5
P10809_1026
17.2
P10809_1045
25.2
P10809_1064
27.9
P10809_1086
35.8
P10809_1113
27.7
Memory CD8 T-cell nTPM: 42.3
Samples: 5
Max nTPM: 47.8
Min nTPM: 37.1
P10809_1012
47.8
P10809_1027
39.8
P10809_1046
37.1
P10809_1065
43.9
P10809_1111
42.9
Naive CD4 T-cell nTPM: 24.2
Samples: 6
Max nTPM: 29.9
Min nTPM: 18.0
P10809_1015
29.9
P10809_1030
25.6
P10809_1049
18.0
P10809_1068
22.4
P10809_1085
26.0
P10809_1112
23.5
Naive CD8 T-cell nTPM: 32.1
Samples: 6
Max nTPM: 43.2
Min nTPM: 26.5
P10809_1016
28.0
P10809_1031
26.5
P10809_1050
37.8
P10809_1069
29.9
P10809_1087
43.2
P10809_1110
27.3
T-reg nTPM: 36.2
Samples: 6
Max nTPM: 49.2
Min nTPM: 24.2
P10809_1018
37.6
P10809_1037
30.8
P10809_1056
37.0
P10809_1075
38.2
P10809_1094
24.2
P10809_1106
49.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
282.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 179.0
Samples: 4
Max nTPM: 263.4
Min nTPM: 80.3
RHH5202_R3573
178.7
RHH5230_R3602
193.4
RHH5259_R3631
263.4
RHH5288_R3660
80.3
Effector memory CD8 T-cell nTPM: 232.0
Samples: 4
Max nTPM: 360.2
Min nTPM: 72.6
RHH5203_R3574
194.2
RHH5231_R3603
300.8
RHH5260_R3632
360.2
RHH5289_R3661
72.6
MAIT T-cell nTPM: 158.9
Samples: 4
Max nTPM: 207.0
Min nTPM: 71.1
RHH5233_R3605
207.0
RHH5205_R3576
159.8
RHH5262_R3634
197.7
RHH5297_R3663
71.1
Memory CD4 T-cell TFH nTPM: 120.1
Samples: 4
Max nTPM: 175.2
Min nTPM: 28.3
RHH5300_R3666
28.3
RHH5236_R3608
124.7
RHH5265_R3637
175.2
RHH5208_R3579
152.2
Memory CD4 T-cell Th1 nTPM: 159.6
Samples: 4
Max nTPM: 253.7
Min nTPM: 48.2
RHH5210_R3581
107.4
RHH5302_R3668
48.2
RHH5238_R3610
253.7
RHH5267_R3639
229.2
Memory CD4 T-cell Th1/Th17 nTPM: 152.2
Samples: 4
Max nTPM: 247.7
Min nTPM: 58.3
RHH5303_R3669
58.3
RHH5211_R3582
156.1
RHH5239_R3611
247.7
RHH5268_R3640
146.5
Memory CD4 T-cell Th17 nTPM: 135.8
Samples: 4
Max nTPM: 164.2
Min nTPM: 69.1
RHH5304_R3670
69.1
RHH5212_R3583
149.0
RHH5240_R3612
160.8
RHH5269_R3641
164.2
Memory CD4 T-cell Th2 nTPM: 151.2
Samples: 4
Max nTPM: 208.2
Min nTPM: 88.5
RHH5305_R3671
88.5
RHH5213_R3584
137.5
RHH5241_R3613
170.4
RHH5270_R3642
208.2
Naive CD4 T-cell nTPM: 108.9
Samples: 4
Max nTPM: 162.9
Min nTPM: 57.4
RHH5306_R3672
57.4
RHH5214_R3585
77.2
RHH5242_R3614
138.2
RHH5271_R3643
162.9
Naive CD8 T-cell nTPM: 145.5
Samples: 4
Max nTPM: 231.6
Min nTPM: 67.6
RHH5201_R3572
113.6
RHH5229_R3601
231.6
RHH5258_R3630
169.0
RHH5287_R3659
67.6
Non-Vd2 gdTCR nTPM: 258.7
Samples: 4
Max nTPM: 409.8
Min nTPM: 75.9
RHH5235_R3607
320.3
RHH5264_R3636
409.8
RHH5207_R3578
228.9
RHH5299_R3665
75.9
T-reg nTPM: 143.3
Samples: 4
Max nTPM: 201.9
Min nTPM: 57.6
RHH5301_R3667
57.6
RHH5237_R3609
175.1
RHH5266_R3638
201.9
RHH5209_R3580
138.4
Terminal effector memory CD4 T-cell nTPM: 282.4
Samples: 2
Max nTPM: 289.2
Min nTPM: 275.6
RHH5243_R3615
275.6
RHH5272_R3644
289.2
Terminal effector memory CD8 T-cell nTPM: 244.8
Samples: 4
Max nTPM: 397.1
Min nTPM: 100.8
RHH5232_R3604
280.1
RHH5204_R3575
201.2
RHH5261_R3633
397.1
RHH5296_R3662
100.8
Vd2 gdTCR nTPM: 224.8
Samples: 4
Max nTPM: 369.7
Min nTPM: 61.7
RHH5234_R3606
224.1
RHH5206_R3577
243.5
RHH5263_R3635
369.7
RHH5298_R3664
61.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
