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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
136.2
nTPM
Monaco:
688.1
nTPM
Schmiedel:
199.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
136.2
HPA sample
nTPM
gdT-cell nTPM: 116.2
Samples: 6
Max nTPM: 148.1
Min nTPM: 61.0
P10809_1007
116.1
P10809_1022
148.1
P10809_1041
121.1
P10809_1060
61.0
P10809_1077
118.3
P10809_1098
132.6
MAIT T-cell nTPM: 91.4
Samples: 6
Max nTPM: 122.6
Min nTPM: 65.8
P10809_1006
122.6
P10809_1024
72.8
P10809_1043
99.1
P10809_1062
65.8
P10809_1083
89.6
P10809_1097
98.7
Memory CD4 T-cell nTPM: 88.6
Samples: 6
Max nTPM: 112.5
Min nTPM: 55.5
P10809_1014
98.8
P10809_1026
88.8
P10809_1045
112.5
P10809_1064
93.4
P10809_1086
82.3
P10809_1113
55.5
Memory CD8 T-cell nTPM: 136.2
Samples: 5
Max nTPM: 166.6
Min nTPM: 109.1
P10809_1012
130.7
P10809_1027
115.1
P10809_1046
159.3
P10809_1065
109.1
P10809_1111
166.6
Naive CD4 T-cell nTPM: 107.8
Samples: 6
Max nTPM: 131.5
Min nTPM: 88.3
P10809_1015
101.5
P10809_1030
88.3
P10809_1049
116.3
P10809_1068
131.5
P10809_1085
103.0
P10809_1112
106.1
Naive CD8 T-cell nTPM: 104.9
Samples: 6
Max nTPM: 127.2
Min nTPM: 68.0
P10809_1016
87.8
P10809_1031
117.2
P10809_1050
127.2
P10809_1069
112.7
P10809_1087
68.0
P10809_1110
116.4
T-reg nTPM: 80.5
Samples: 6
Max nTPM: 113.7
Min nTPM: 39.3
P10809_1018
51.4
P10809_1037
87.0
P10809_1056
101.2
P10809_1075
113.7
P10809_1094
39.3
P10809_1106
90.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
688.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 526.8
Samples: 4
Max nTPM: 721.5
Min nTPM: 284.4
RHH5202_R3573
284.4
RHH5230_R3602
623.2
RHH5259_R3631
721.5
RHH5288_R3660
478.2
Effector memory CD8 T-cell nTPM: 659.0
Samples: 4
Max nTPM: 831.1
Min nTPM: 425.5
RHH5203_R3574
589.7
RHH5231_R3603
789.8
RHH5260_R3632
831.1
RHH5289_R3661
425.5
MAIT T-cell nTPM: 481.8
Samples: 4
Max nTPM: 513.0
Min nTPM: 457.0
RHH5233_R3605
478.7
RHH5205_R3576
457.0
RHH5262_R3634
478.4
RHH5297_R3663
513.0
Memory CD4 T-cell TFH nTPM: 494.2
Samples: 4
Max nTPM: 601.2
Min nTPM: 248.6
RHH5300_R3666
561.0
RHH5236_R3608
565.9
RHH5265_R3637
601.2
RHH5208_R3579
248.6
Memory CD4 T-cell Th1 nTPM: 470.1
Samples: 4
Max nTPM: 571.1
Min nTPM: 348.8
RHH5210_R3581
483.2
RHH5302_R3668
348.8
RHH5238_R3610
571.1
RHH5267_R3639
477.4
Memory CD4 T-cell Th1/Th17 nTPM: 448.9
Samples: 4
Max nTPM: 621.3
Min nTPM: 208.0
RHH5303_R3669
208.0
RHH5211_R3582
504.2
RHH5239_R3611
621.3
RHH5268_R3640
462.0
Memory CD4 T-cell Th17 nTPM: 416.3
Samples: 4
Max nTPM: 482.5
Min nTPM: 328.7
RHH5304_R3670
328.7
RHH5212_R3583
467.6
RHH5240_R3612
386.3
RHH5269_R3641
482.5
Memory CD4 T-cell Th2 nTPM: 350.7
Samples: 4
Max nTPM: 407.1
Min nTPM: 283.3
RHH5305_R3671
381.3
RHH5213_R3584
331.2
RHH5241_R3613
283.3
RHH5270_R3642
407.1
Naive CD4 T-cell nTPM: 455.5
Samples: 4
Max nTPM: 527.8
Min nTPM: 410.5
RHH5306_R3672
427.3
RHH5214_R3585
456.2
RHH5242_R3614
527.8
RHH5271_R3643
410.5
Naive CD8 T-cell nTPM: 522.2
Samples: 4
Max nTPM: 648.8
Min nTPM: 274.1
RHH5201_R3572
274.1
RHH5229_R3601
648.8
RHH5258_R3630
539.2
RHH5287_R3659
626.7
Non-Vd2 gdTCR nTPM: 688.1
Samples: 4
Max nTPM: 874.6
Min nTPM: 455.0
RHH5235_R3607
874.6
RHH5264_R3636
608.6
RHH5207_R3578
455.0
RHH5299_R3665
814.0
T-reg nTPM: 433.4
Samples: 4
Max nTPM: 487.1
Min nTPM: 408.8
RHH5301_R3667
409.0
RHH5237_R3609
408.8
RHH5266_R3638
428.8
RHH5209_R3580
487.1
Terminal effector memory CD4 T-cell nTPM: 623.4
Samples: 2
Max nTPM: 709.0
Min nTPM: 537.7
RHH5243_R3615
709.0
RHH5272_R3644
537.7
Terminal effector memory CD8 T-cell nTPM: 603.2
Samples: 4
Max nTPM: 798.3
Min nTPM: 383.9
RHH5232_R3604
586.2
RHH5204_R3575
644.3
RHH5261_R3633
798.3
RHH5296_R3662
383.9
Vd2 gdTCR nTPM: 551.9
Samples: 4
Max nTPM: 606.0
Min nTPM: 470.9
RHH5234_R3606
559.0
RHH5206_R3577
470.9
RHH5263_R3635
606.0
RHH5298_R3664
571.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
