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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
196.1
nTPM
Monaco:
278.4
nTPM
Schmiedel:
170.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
196.1
HPA sample
nTPM
gdT-cell nTPM: 90.9
Samples: 6
Max nTPM: 126.5
Min nTPM: 55.9
P10809_1007
55.9
P10809_1022
120.3
P10809_1041
92.4
P10809_1060
82.0
P10809_1077
68.0
P10809_1098
126.5
MAIT T-cell nTPM: 196.1
Samples: 6
Max nTPM: 294.2
Min nTPM: 143.8
P10809_1006
174.6
P10809_1024
294.2
P10809_1043
143.8
P10809_1062
186.5
P10809_1083
165.9
P10809_1097
211.8
Memory CD4 T-cell nTPM: 50.9
Samples: 6
Max nTPM: 70.1
Min nTPM: 40.5
P10809_1014
44.5
P10809_1026
40.5
P10809_1045
49.3
P10809_1064
57.2
P10809_1086
70.1
P10809_1113
43.8
Memory CD8 T-cell nTPM: 77.8
Samples: 5
Max nTPM: 97.3
Min nTPM: 64.8
P10809_1012
69.0
P10809_1027
81.6
P10809_1046
76.1
P10809_1065
64.8
P10809_1111
97.3
Naive CD4 T-cell nTPM: 33.5
Samples: 6
Max nTPM: 37.4
Min nTPM: 29.5
P10809_1015
33.1
P10809_1030
29.5
P10809_1049
34.7
P10809_1068
37.4
P10809_1085
36.4
P10809_1112
30.1
Naive CD8 T-cell nTPM: 37.1
Samples: 6
Max nTPM: 55.3
Min nTPM: 23.3
P10809_1016
28.2
P10809_1031
23.3
P10809_1050
39.8
P10809_1069
40.8
P10809_1087
55.3
P10809_1110
35.3
T-reg nTPM: 40.1
Samples: 6
Max nTPM: 47.0
Min nTPM: 29.2
P10809_1018
29.2
P10809_1037
47.0
P10809_1056
30.3
P10809_1075
46.6
P10809_1094
45.7
P10809_1106
41.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
278.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 80.4
Samples: 4
Max nTPM: 108.3
Min nTPM: 69.8
RHH5202_R3573
71.8
RHH5230_R3602
108.3
RHH5259_R3631
69.8
RHH5288_R3660
71.5
Effector memory CD8 T-cell nTPM: 135.7
Samples: 4
Max nTPM: 151.8
Min nTPM: 112.9
RHH5203_R3574
151.8
RHH5231_R3603
150.4
RHH5260_R3632
112.9
RHH5289_R3661
127.8
MAIT T-cell nTPM: 278.4
Samples: 4
Max nTPM: 334.2
Min nTPM: 231.8
RHH5233_R3605
270.2
RHH5205_R3576
334.2
RHH5262_R3634
277.4
RHH5297_R3663
231.8
Memory CD4 T-cell TFH nTPM: 60.6
Samples: 4
Max nTPM: 80.2
Min nTPM: 45.7
RHH5300_R3666
45.7
RHH5236_R3608
60.3
RHH5265_R3637
56.3
RHH5208_R3579
80.2
Memory CD4 T-cell Th1 nTPM: 70.1
Samples: 4
Max nTPM: 106.1
Min nTPM: 48.3
RHH5210_R3581
61.4
RHH5302_R3668
64.6
RHH5238_R3610
48.3
RHH5267_R3639
106.1
Memory CD4 T-cell Th1/Th17 nTPM: 111.4
Samples: 4
Max nTPM: 118.9
Min nTPM: 99.2
RHH5303_R3669
114.6
RHH5211_R3582
118.9
RHH5239_R3611
99.2
RHH5268_R3640
112.7
Memory CD4 T-cell Th17 nTPM: 91.6
Samples: 4
Max nTPM: 111.8
Min nTPM: 77.6
RHH5304_R3670
111.8
RHH5212_R3583
77.6
RHH5240_R3612
82.9
RHH5269_R3641
94.0
Memory CD4 T-cell Th2 nTPM: 58.8
Samples: 4
Max nTPM: 81.6
Min nTPM: 44.9
RHH5305_R3671
49.6
RHH5213_R3584
59.0
RHH5241_R3613
44.9
RHH5270_R3642
81.6
Naive CD4 T-cell nTPM: 48.3
Samples: 4
Max nTPM: 55.8
Min nTPM: 42.1
RHH5306_R3672
42.2
RHH5214_R3585
53.2
RHH5242_R3614
55.8
RHH5271_R3643
42.1
Naive CD8 T-cell nTPM: 40.9
Samples: 4
Max nTPM: 60.5
Min nTPM: 18.0
RHH5201_R3572
60.5
RHH5229_R3601
18.0
RHH5258_R3630
47.1
RHH5287_R3659
38.0
Non-Vd2 gdTCR nTPM: 122.9
Samples: 4
Max nTPM: 183.0
Min nTPM: 69.3
RHH5235_R3607
120.5
RHH5264_R3636
118.7
RHH5207_R3578
183.0
RHH5299_R3665
69.3
T-reg nTPM: 54.5
Samples: 4
Max nTPM: 69.0
Min nTPM: 49.1
RHH5301_R3667
49.1
RHH5237_R3609
49.4
RHH5266_R3638
50.3
RHH5209_R3580
69.0
Terminal effector memory CD4 T-cell nTPM: 157.7
Samples: 2
Max nTPM: 174.9
Min nTPM: 140.4
RHH5243_R3615
140.4
RHH5272_R3644
174.9
Terminal effector memory CD8 T-cell nTPM: 105.7
Samples: 4
Max nTPM: 116.3
Min nTPM: 96.9
RHH5232_R3604
106.2
RHH5204_R3575
116.3
RHH5261_R3633
103.2
RHH5296_R3662
96.9
Vd2 gdTCR nTPM: 226.6
Samples: 4
Max nTPM: 310.7
Min nTPM: 177.4
RHH5234_R3606
213.1
RHH5206_R3577
205.1
RHH5263_R3635
310.7
RHH5298_R3664
177.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
