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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
66.6
nTPM
Monaco:
178.5
nTPM
Schmiedel:
290.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
66.6
HPA sample
nTPM
gdT-cell nTPM: 66.6
Samples: 6
Max nTPM: 83.4
Min nTPM: 47.4
P10809_1007
67.2
P10809_1022
83.4
P10809_1041
83.4
P10809_1060
60.3
P10809_1077
58.1
P10809_1098
47.4
MAIT T-cell nTPM: 61.9
Samples: 6
Max nTPM: 67.6
Min nTPM: 57.3
P10809_1006
63.7
P10809_1024
67.6
P10809_1043
63.1
P10809_1062
57.3
P10809_1083
57.4
P10809_1097
62.4
Memory CD4 T-cell nTPM: 27.7
Samples: 6
Max nTPM: 30.8
Min nTPM: 25.7
P10809_1014
30.7
P10809_1026
26.0
P10809_1045
26.3
P10809_1064
30.8
P10809_1086
26.5
P10809_1113
25.7
Memory CD8 T-cell nTPM: 40.8
Samples: 5
Max nTPM: 47.1
Min nTPM: 29.6
P10809_1012
47.1
P10809_1027
39.4
P10809_1046
45.0
P10809_1065
42.7
P10809_1111
29.6
Naive CD4 T-cell nTPM: 10.4
Samples: 6
Max nTPM: 14.1
Min nTPM: 7.7
P10809_1015
8.5
P10809_1030
10.5
P10809_1049
11.6
P10809_1068
7.7
P10809_1085
14.1
P10809_1112
10.2
Naive CD8 T-cell nTPM: 27.4
Samples: 6
Max nTPM: 36.1
Min nTPM: 14.9
P10809_1016
14.9
P10809_1031
35.9
P10809_1050
27.8
P10809_1069
34.5
P10809_1087
36.1
P10809_1110
14.9
T-reg nTPM: 34.2
Samples: 6
Max nTPM: 59.2
Min nTPM: 22.5
P10809_1018
59.2
P10809_1037
22.5
P10809_1056
23.8
P10809_1075
36.0
P10809_1094
39.4
P10809_1106
24.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
178.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 47.7
Samples: 4
Max nTPM: 60.3
Min nTPM: 36.4
RHH5202_R3573
36.4
RHH5230_R3602
60.3
RHH5259_R3631
39.9
RHH5288_R3660
54.0
Effector memory CD8 T-cell nTPM: 106.4
Samples: 4
Max nTPM: 157.0
Min nTPM: 51.5
RHH5203_R3574
89.1
RHH5231_R3603
157.0
RHH5260_R3632
128.0
RHH5289_R3661
51.5
MAIT T-cell nTPM: 145.2
Samples: 4
Max nTPM: 177.8
Min nTPM: 112.9
RHH5233_R3605
177.8
RHH5205_R3576
117.3
RHH5262_R3634
172.9
RHH5297_R3663
112.9
Memory CD4 T-cell TFH nTPM: 47.2
Samples: 4
Max nTPM: 56.3
Min nTPM: 36.4
RHH5300_R3666
48.2
RHH5236_R3608
56.3
RHH5265_R3637
36.4
RHH5208_R3579
47.8
Memory CD4 T-cell Th1 nTPM: 39.3
Samples: 4
Max nTPM: 43.7
Min nTPM: 32.9
RHH5210_R3581
32.9
RHH5302_R3668
36.9
RHH5238_R3610
43.7
RHH5267_R3639
43.7
Memory CD4 T-cell Th1/Th17 nTPM: 76.2
Samples: 4
Max nTPM: 111.4
Min nTPM: 44.3
RHH5303_R3669
74.4
RHH5211_R3582
111.4
RHH5239_R3611
44.3
RHH5268_R3640
74.6
Memory CD4 T-cell Th17 nTPM: 65.0
Samples: 4
Max nTPM: 76.3
Min nTPM: 54.0
RHH5304_R3670
76.3
RHH5212_R3583
72.8
RHH5240_R3612
54.0
RHH5269_R3641
56.7
Memory CD4 T-cell Th2 nTPM: 32.4
Samples: 4
Max nTPM: 40.2
Min nTPM: 26.3
RHH5305_R3671
33.9
RHH5213_R3584
40.2
RHH5241_R3613
26.3
RHH5270_R3642
29.2
Naive CD4 T-cell nTPM: 19.6
Samples: 4
Max nTPM: 27.2
Min nTPM: 11.9
RHH5306_R3672
17.7
RHH5214_R3585
11.9
RHH5242_R3614
21.4
RHH5271_R3643
27.2
Naive CD8 T-cell nTPM: 23.8
Samples: 4
Max nTPM: 41.6
Min nTPM: 15.8
RHH5201_R3572
19.3
RHH5229_R3601
15.8
RHH5258_R3630
41.6
RHH5287_R3659
18.3
Non-Vd2 gdTCR nTPM: 164.8
Samples: 4
Max nTPM: 266.2
Min nTPM: 105.1
RHH5235_R3607
123.9
RHH5264_R3636
266.2
RHH5207_R3578
163.8
RHH5299_R3665
105.1
T-reg nTPM: 43.5
Samples: 4
Max nTPM: 46.6
Min nTPM: 41.3
RHH5301_R3667
44.6
RHH5237_R3609
46.6
RHH5266_R3638
41.3
RHH5209_R3580
41.5
Terminal effector memory CD4 T-cell nTPM: 123.2
Samples: 2
Max nTPM: 129.0
Min nTPM: 117.3
RHH5243_R3615
117.3
RHH5272_R3644
129.0
Terminal effector memory CD8 T-cell nTPM: 140.7
Samples: 4
Max nTPM: 176.7
Min nTPM: 76.8
RHH5232_R3604
169.2
RHH5204_R3575
176.7
RHH5261_R3633
140.1
RHH5296_R3662
76.8
Vd2 gdTCR nTPM: 178.5
Samples: 4
Max nTPM: 219.6
Min nTPM: 95.8
RHH5234_R3606
179.5
RHH5206_R3577
219.2
RHH5263_R3635
219.6
RHH5298_R3664
95.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
