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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
70.9
nTPM
Monaco:
316.2
nTPM
Schmiedel:
536.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
70.9
HPA sample
nTPM
gdT-cell nTPM: 48.3
Samples: 6
Max nTPM: 95.8
Min nTPM: 17.9
P10809_1007
95.8
P10809_1022
43.0
P10809_1041
39.3
P10809_1060
17.9
P10809_1077
40.8
P10809_1098
53.1
MAIT T-cell nTPM: 26.4
Samples: 6
Max nTPM: 63.0
Min nTPM: 10.3
P10809_1006
63.0
P10809_1024
10.3
P10809_1043
26.5
P10809_1062
13.2
P10809_1083
11.8
P10809_1097
33.8
Memory CD4 T-cell nTPM: 34.4
Samples: 6
Max nTPM: 62.5
Min nTPM: 9.8
P10809_1014
62.5
P10809_1026
31.6
P10809_1045
44.8
P10809_1064
42.6
P10809_1086
15.3
P10809_1113
9.8
Memory CD8 T-cell nTPM: 40.4
Samples: 5
Max nTPM: 64.3
Min nTPM: 17.0
P10809_1012
64.3
P10809_1027
17.0
P10809_1046
56.1
P10809_1065
34.3
P10809_1111
30.4
Naive CD4 T-cell nTPM: 9.8
Samples: 6
Max nTPM: 17.9
Min nTPM: 3.3
P10809_1015
17.9
P10809_1030
3.3
P10809_1049
6.7
P10809_1068
9.7
P10809_1085
14.4
P10809_1112
7.0
Naive CD8 T-cell nTPM: 15.5
Samples: 6
Max nTPM: 24.1
Min nTPM: 12.0
P10809_1016
12.0
P10809_1031
18.1
P10809_1050
13.6
P10809_1069
24.1
P10809_1087
12.2
P10809_1110
12.9
T-reg nTPM: 70.9
Samples: 6
Max nTPM: 96.6
Min nTPM: 44.2
P10809_1018
96.6
P10809_1037
68.3
P10809_1056
75.8
P10809_1075
63.5
P10809_1094
44.2
P10809_1106
77.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
316.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 76.4
Samples: 4
Max nTPM: 156.1
Min nTPM: 24.0
RHH5202_R3573
24.0
RHH5230_R3602
91.8
RHH5259_R3631
156.1
RHH5288_R3660
33.5
Effector memory CD8 T-cell nTPM: 203.8
Samples: 4
Max nTPM: 385.3
Min nTPM: 59.6
RHH5203_R3574
93.1
RHH5231_R3603
277.2
RHH5260_R3632
385.3
RHH5289_R3661
59.6
MAIT T-cell nTPM: 94.9
Samples: 4
Max nTPM: 154.3
Min nTPM: 62.3
RHH5233_R3605
62.3
RHH5205_R3576
91.5
RHH5262_R3634
154.3
RHH5297_R3663
71.4
Memory CD4 T-cell TFH nTPM: 110.9
Samples: 4
Max nTPM: 190.3
Min nTPM: 47.4
RHH5300_R3666
128.4
RHH5236_R3608
190.3
RHH5265_R3637
77.5
RHH5208_R3579
47.4
Memory CD4 T-cell Th1 nTPM: 155.9
Samples: 4
Max nTPM: 307.2
Min nTPM: 44.5
RHH5210_R3581
52.8
RHH5302_R3668
44.5
RHH5238_R3610
307.2
RHH5267_R3639
218.9
Memory CD4 T-cell Th1/Th17 nTPM: 159.4
Samples: 4
Max nTPM: 237.3
Min nTPM: 28.2
RHH5303_R3669
28.2
RHH5211_R3582
174.0
RHH5239_R3611
198.0
RHH5268_R3640
237.3
Memory CD4 T-cell Th17 nTPM: 141.1
Samples: 4
Max nTPM: 229.1
Min nTPM: 47.8
RHH5304_R3670
47.8
RHH5212_R3583
229.1
RHH5240_R3612
70.5
RHH5269_R3641
217.0
Memory CD4 T-cell Th2 nTPM: 97.2
Samples: 4
Max nTPM: 151.6
Min nTPM: 36.8
RHH5305_R3671
65.2
RHH5213_R3584
135.1
RHH5241_R3613
36.8
RHH5270_R3642
151.6
Naive CD4 T-cell nTPM: 40.5
Samples: 4
Max nTPM: 47.5
Min nTPM: 34.5
RHH5306_R3672
47.5
RHH5214_R3585
44.1
RHH5242_R3614
34.5
RHH5271_R3643
35.7
Naive CD8 T-cell nTPM: 19.1
Samples: 4
Max nTPM: 43.2
Min nTPM: 2.6
RHH5201_R3572
2.6
RHH5229_R3601
43.2
RHH5258_R3630
9.2
RHH5287_R3659
21.4
Non-Vd2 gdTCR nTPM: 172.3
Samples: 4
Max nTPM: 275.5
Min nTPM: 93.0
RHH5235_R3607
275.5
RHH5264_R3636
93.0
RHH5207_R3578
113.3
RHH5299_R3665
207.4
T-reg nTPM: 316.2
Samples: 4
Max nTPM: 434.7
Min nTPM: 200.2
RHH5301_R3667
200.2
RHH5237_R3609
434.7
RHH5266_R3638
327.8
RHH5209_R3580
302.2
Terminal effector memory CD4 T-cell nTPM: 301.6
Samples: 2
Max nTPM: 447.4
Min nTPM: 155.8
RHH5243_R3615
447.4
RHH5272_R3644
155.8
Terminal effector memory CD8 T-cell nTPM: 196.7
Samples: 4
Max nTPM: 447.1
Min nTPM: 52.1
RHH5232_R3604
141.5
RHH5204_R3575
146.0
RHH5261_R3633
447.1
RHH5296_R3662
52.1
Vd2 gdTCR nTPM: 148.2
Samples: 4
Max nTPM: 190.6
Min nTPM: 113.4
RHH5234_R3606
136.0
RHH5206_R3577
152.7
RHH5263_R3635
190.6
RHH5298_R3664
113.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
