We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
96.1
nTPM
Monaco:
115.4
nTPM
Schmiedel:
99.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
96.1
HPA sample
nTPM
gdT-cell nTPM: 83.6
Samples: 6
Max nTPM: 112.0
Min nTPM: 54.9
P10809_1007
54.9
P10809_1022
112.0
P10809_1041
81.8
P10809_1060
88.8
P10809_1077
79.6
P10809_1098
84.6
MAIT T-cell nTPM: 71.0
Samples: 6
Max nTPM: 97.2
Min nTPM: 50.3
P10809_1006
50.3
P10809_1024
97.2
P10809_1043
65.3
P10809_1062
63.6
P10809_1083
62.4
P10809_1097
87.2
Memory CD4 T-cell nTPM: 70.6
Samples: 6
Max nTPM: 84.4
Min nTPM: 51.7
P10809_1014
51.7
P10809_1026
67.8
P10809_1045
84.4
P10809_1064
70.3
P10809_1086
74.0
P10809_1113
75.3
Memory CD8 T-cell nTPM: 82.2
Samples: 5
Max nTPM: 91.9
Min nTPM: 67.6
P10809_1012
67.6
P10809_1027
78.6
P10809_1046
91.9
P10809_1065
87.0
P10809_1111
85.8
Naive CD4 T-cell nTPM: 67.3
Samples: 6
Max nTPM: 94.6
Min nTPM: 40.8
P10809_1015
40.8
P10809_1030
56.3
P10809_1049
94.6
P10809_1068
69.0
P10809_1085
76.7
P10809_1112
66.2
Naive CD8 T-cell nTPM: 66.9
Samples: 6
Max nTPM: 103.1
Min nTPM: 38.0
P10809_1016
38.0
P10809_1031
54.6
P10809_1050
67.1
P10809_1069
103.1
P10809_1087
76.8
P10809_1110
61.5
T-reg nTPM: 96.1
Samples: 6
Max nTPM: 118.7
Min nTPM: 81.5
P10809_1018
83.8
P10809_1037
92.0
P10809_1056
118.7
P10809_1075
81.5
P10809_1094
96.2
P10809_1106
104.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
115.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 74.0
Samples: 4
Max nTPM: 81.2
Min nTPM: 64.2
RHH5202_R3573
80.3
RHH5230_R3602
64.2
RHH5259_R3631
81.2
RHH5288_R3660
70.1
Effector memory CD8 T-cell nTPM: 115.4
Samples: 4
Max nTPM: 119.8
Min nTPM: 105.8
RHH5203_R3574
119.3
RHH5231_R3603
105.8
RHH5260_R3632
116.7
RHH5289_R3661
119.8
MAIT T-cell nTPM: 96.6
Samples: 4
Max nTPM: 112.2
Min nTPM: 84.3
RHH5233_R3605
84.3
RHH5205_R3576
112.2
RHH5262_R3634
97.1
RHH5297_R3663
92.8
Memory CD4 T-cell TFH nTPM: 94.7
Samples: 4
Max nTPM: 115.0
Min nTPM: 74.8
RHH5300_R3666
74.8
RHH5236_R3608
115.0
RHH5265_R3637
96.9
RHH5208_R3579
92.2
Memory CD4 T-cell Th1 nTPM: 96.4
Samples: 4
Max nTPM: 111.2
Min nTPM: 87.4
RHH5210_R3581
97.2
RHH5302_R3668
87.4
RHH5238_R3610
89.9
RHH5267_R3639
111.2
Memory CD4 T-cell Th1/Th17 nTPM: 97.8
Samples: 4
Max nTPM: 115.7
Min nTPM: 79.9
RHH5303_R3669
106.3
RHH5211_R3582
89.1
RHH5239_R3611
79.9
RHH5268_R3640
115.7
Memory CD4 T-cell Th17 nTPM: 101.6
Samples: 4
Max nTPM: 120.2
Min nTPM: 89.1
RHH5304_R3670
101.1
RHH5212_R3583
89.1
RHH5240_R3612
120.2
RHH5269_R3641
95.8
Memory CD4 T-cell Th2 nTPM: 96.1
Samples: 4
Max nTPM: 113.1
Min nTPM: 86.4
RHH5305_R3671
88.8
RHH5213_R3584
113.1
RHH5241_R3613
86.4
RHH5270_R3642
96.0
Naive CD4 T-cell nTPM: 86.7
Samples: 4
Max nTPM: 104.1
Min nTPM: 67.5
RHH5306_R3672
94.5
RHH5214_R3585
80.7
RHH5242_R3614
67.5
RHH5271_R3643
104.1
Naive CD8 T-cell nTPM: 81.3
Samples: 4
Max nTPM: 110.1
Min nTPM: 48.2
RHH5201_R3572
110.1
RHH5229_R3601
48.2
RHH5258_R3630
81.5
RHH5287_R3659
85.5
Non-Vd2 gdTCR nTPM: 107.8
Samples: 4
Max nTPM: 134.7
Min nTPM: 93.0
RHH5235_R3607
94.9
RHH5264_R3636
134.7
RHH5207_R3578
108.6
RHH5299_R3665
93.0
T-reg nTPM: 98.0
Samples: 4
Max nTPM: 116.5
Min nTPM: 90.2
RHH5301_R3667
90.2
RHH5237_R3609
116.5
RHH5266_R3638
91.5
RHH5209_R3580
93.9
Terminal effector memory CD4 T-cell nTPM: 111.0
Samples: 2
Max nTPM: 134.5
Min nTPM: 87.4
RHH5243_R3615
87.4
RHH5272_R3644
134.5
Terminal effector memory CD8 T-cell nTPM: 109.4
Samples: 4
Max nTPM: 126.8
Min nTPM: 92.2
RHH5232_R3604
120.5
RHH5204_R3575
92.2
RHH5261_R3633
126.8
RHH5296_R3662
97.9
Vd2 gdTCR nTPM: 82.3
Samples: 4
Max nTPM: 101.2
Min nTPM: 61.8
RHH5234_R3606
61.8
RHH5206_R3577
101.2
RHH5263_R3635
86.7
RHH5298_R3664
79.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
