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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
69.9
nTPM
Monaco:
93.2
nTPM
Schmiedel:
21.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
69.9
HPA sample
nTPM
gdT-cell nTPM: 62.9
Samples: 6
Max nTPM: 80.2
Min nTPM: 49.8
P10809_1007
49.8
P10809_1022
59.8
P10809_1041
56.7
P10809_1060
67.6
P10809_1077
63.1
P10809_1098
80.2
MAIT T-cell nTPM: 69.9
Samples: 6
Max nTPM: 92.6
Min nTPM: 53.3
P10809_1006
58.6
P10809_1024
80.1
P10809_1043
53.3
P10809_1062
63.8
P10809_1083
71.1
P10809_1097
92.6
Memory CD4 T-cell nTPM: 53.3
Samples: 6
Max nTPM: 67.2
Min nTPM: 42.2
P10809_1014
42.2
P10809_1026
49.9
P10809_1045
50.9
P10809_1064
59.3
P10809_1086
67.2
P10809_1113
50.1
Memory CD8 T-cell nTPM: 67.1
Samples: 5
Max nTPM: 88.9
Min nTPM: 51.2
P10809_1012
54.7
P10809_1027
61.8
P10809_1046
51.2
P10809_1065
78.7
P10809_1111
88.9
Naive CD4 T-cell nTPM: 50.7
Samples: 6
Max nTPM: 62.9
Min nTPM: 44.0
P10809_1015
44.0
P10809_1030
53.1
P10809_1049
50.4
P10809_1068
48.1
P10809_1085
62.9
P10809_1112
45.8
Naive CD8 T-cell nTPM: 59.7
Samples: 6
Max nTPM: 79.5
Min nTPM: 39.1
P10809_1016
39.1
P10809_1031
61.2
P10809_1050
44.1
P10809_1069
76.0
P10809_1087
79.5
P10809_1110
58.3
T-reg nTPM: 60.7
Samples: 6
Max nTPM: 82.1
Min nTPM: 46.1
P10809_1018
49.7
P10809_1037
46.1
P10809_1056
68.7
P10809_1075
57.2
P10809_1094
82.1
P10809_1106
60.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
93.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 62.7
Samples: 4
Max nTPM: 72.7
Min nTPM: 42.0
RHH5202_R3573
72.7
RHH5230_R3602
72.0
RHH5259_R3631
42.0
RHH5288_R3660
63.9
Effector memory CD8 T-cell nTPM: 93.2
Samples: 4
Max nTPM: 120.9
Min nTPM: 61.6
RHH5203_R3574
97.7
RHH5231_R3603
120.9
RHH5260_R3632
61.6
RHH5289_R3661
92.4
MAIT T-cell nTPM: 78.3
Samples: 4
Max nTPM: 97.2
Min nTPM: 52.3
RHH5233_R3605
97.2
RHH5205_R3576
52.3
RHH5262_R3634
84.7
RHH5297_R3663
79.1
Memory CD4 T-cell TFH nTPM: 71.0
Samples: 4
Max nTPM: 101.1
Min nTPM: 54.7
RHH5300_R3666
54.7
RHH5236_R3608
101.1
RHH5265_R3637
65.0
RHH5208_R3579
63.0
Memory CD4 T-cell Th1 nTPM: 52.7
Samples: 4
Max nTPM: 63.4
Min nTPM: 33.6
RHH5210_R3581
58.8
RHH5302_R3668
63.4
RHH5238_R3610
33.6
RHH5267_R3639
55.0
Memory CD4 T-cell Th1/Th17 nTPM: 59.7
Samples: 4
Max nTPM: 81.5
Min nTPM: 27.7
RHH5303_R3669
76.8
RHH5211_R3582
81.5
RHH5239_R3611
27.7
RHH5268_R3640
52.7
Memory CD4 T-cell Th17 nTPM: 60.0
Samples: 4
Max nTPM: 68.9
Min nTPM: 50.8
RHH5304_R3670
64.6
RHH5212_R3583
68.9
RHH5240_R3612
50.8
RHH5269_R3641
55.5
Memory CD4 T-cell Th2 nTPM: 66.5
Samples: 4
Max nTPM: 74.8
Min nTPM: 51.2
RHH5305_R3671
51.2
RHH5213_R3584
70.0
RHH5241_R3613
70.0
RHH5270_R3642
74.8
Naive CD4 T-cell nTPM: 62.0
Samples: 4
Max nTPM: 78.2
Min nTPM: 47.8
RHH5306_R3672
63.8
RHH5214_R3585
58.1
RHH5242_R3614
47.8
RHH5271_R3643
78.2
Naive CD8 T-cell nTPM: 56.8
Samples: 4
Max nTPM: 90.2
Min nTPM: 26.6
RHH5201_R3572
90.2
RHH5229_R3601
26.6
RHH5258_R3630
63.6
RHH5287_R3659
46.7
Non-Vd2 gdTCR nTPM: 87.0
Samples: 4
Max nTPM: 114.7
Min nTPM: 63.6
RHH5235_R3607
63.6
RHH5264_R3636
114.7
RHH5207_R3578
102.5
RHH5299_R3665
67.3
T-reg nTPM: 60.7
Samples: 4
Max nTPM: 69.4
Min nTPM: 46.3
RHH5301_R3667
67.0
RHH5237_R3609
69.4
RHH5266_R3638
46.3
RHH5209_R3580
60.1
Terminal effector memory CD4 T-cell nTPM: 80.1
Samples: 2
Max nTPM: 86.4
Min nTPM: 73.8
RHH5243_R3615
73.8
RHH5272_R3644
86.4
Terminal effector memory CD8 T-cell nTPM: 78.1
Samples: 4
Max nTPM: 86.7
Min nTPM: 59.8
RHH5232_R3604
86.7
RHH5204_R3575
83.3
RHH5261_R3633
59.8
RHH5296_R3662
82.6
Vd2 gdTCR nTPM: 78.9
Samples: 4
Max nTPM: 90.8
Min nTPM: 67.2
RHH5234_R3606
72.7
RHH5206_R3577
90.8
RHH5263_R3635
85.0
RHH5298_R3664
67.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
