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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
301.7
nTPM
Monaco:
249.2
nTPM
Schmiedel:
318.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
301.7
HPA sample
nTPM
gdT-cell nTPM: 229.1
Samples: 6
Max nTPM: 309.1
Min nTPM: 130.2
P10809_1007
130.2
P10809_1022
290.6
P10809_1041
309.1
P10809_1060
219.2
P10809_1077
217.4
P10809_1098
207.9
MAIT T-cell nTPM: 240.4
Samples: 6
Max nTPM: 315.6
Min nTPM: 143.0
P10809_1006
143.0
P10809_1024
315.6
P10809_1043
267.7
P10809_1062
240.7
P10809_1083
213.4
P10809_1097
262.1
Memory CD4 T-cell nTPM: 238.9
Samples: 6
Max nTPM: 287.3
Min nTPM: 149.2
P10809_1014
149.2
P10809_1026
284.0
P10809_1045
287.3
P10809_1064
245.6
P10809_1086
236.8
P10809_1113
230.3
Memory CD8 T-cell nTPM: 227.2
Samples: 5
Max nTPM: 298.3
Min nTPM: 154.3
P10809_1012
154.3
P10809_1027
224.9
P10809_1046
298.3
P10809_1065
209.9
P10809_1111
248.8
Naive CD4 T-cell nTPM: 247.2
Samples: 6
Max nTPM: 372.9
Min nTPM: 134.1
P10809_1015
134.1
P10809_1030
275.7
P10809_1049
372.9
P10809_1068
238.0
P10809_1085
225.9
P10809_1112
236.4
Naive CD8 T-cell nTPM: 230.0
Samples: 6
Max nTPM: 285.8
Min nTPM: 125.5
P10809_1016
125.5
P10809_1031
285.8
P10809_1050
270.4
P10809_1069
263.6
P10809_1087
215.0
P10809_1110
219.9
T-reg nTPM: 301.7
Samples: 6
Max nTPM: 403.8
Min nTPM: 162.0
P10809_1018
162.0
P10809_1037
329.0
P10809_1056
403.8
P10809_1075
289.4
P10809_1094
326.2
P10809_1106
299.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
249.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 198.8
Samples: 4
Max nTPM: 211.8
Min nTPM: 182.2
RHH5202_R3573
204.9
RHH5230_R3602
211.8
RHH5259_R3631
182.2
RHH5288_R3660
196.4
Effector memory CD8 T-cell nTPM: 245.3
Samples: 4
Max nTPM: 291.7
Min nTPM: 211.1
RHH5203_R3574
222.0
RHH5231_R3603
211.1
RHH5260_R3632
256.5
RHH5289_R3661
291.7
MAIT T-cell nTPM: 218.9
Samples: 4
Max nTPM: 250.1
Min nTPM: 185.6
RHH5233_R3605
208.6
RHH5205_R3576
231.4
RHH5262_R3634
250.1
RHH5297_R3663
185.6
Memory CD4 T-cell TFH nTPM: 229.5
Samples: 4
Max nTPM: 310.6
Min nTPM: 180.3
RHH5300_R3666
180.3
RHH5236_R3608
310.6
RHH5265_R3637
233.4
RHH5208_R3579
193.5
Memory CD4 T-cell Th1 nTPM: 200.0
Samples: 4
Max nTPM: 228.8
Min nTPM: 172.2
RHH5210_R3581
200.1
RHH5302_R3668
228.8
RHH5238_R3610
172.2
RHH5267_R3639
198.9
Memory CD4 T-cell Th1/Th17 nTPM: 231.8
Samples: 4
Max nTPM: 284.4
Min nTPM: 180.4
RHH5303_R3669
284.4
RHH5211_R3582
238.6
RHH5239_R3611
180.4
RHH5268_R3640
223.8
Memory CD4 T-cell Th17 nTPM: 235.7
Samples: 4
Max nTPM: 276.4
Min nTPM: 211.9
RHH5304_R3670
236.5
RHH5212_R3583
211.9
RHH5240_R3612
276.4
RHH5269_R3641
217.8
Memory CD4 T-cell Th2 nTPM: 239.7
Samples: 4
Max nTPM: 265.9
Min nTPM: 223.9
RHH5305_R3671
234.3
RHH5213_R3584
265.9
RHH5241_R3613
223.9
RHH5270_R3642
234.6
Naive CD4 T-cell nTPM: 210.5
Samples: 4
Max nTPM: 234.8
Min nTPM: 187.8
RHH5306_R3672
192.9
RHH5214_R3585
234.8
RHH5242_R3614
187.8
RHH5271_R3643
226.4
Naive CD8 T-cell nTPM: 199.1
Samples: 4
Max nTPM: 227.8
Min nTPM: 160.2
RHH5201_R3572
213.5
RHH5229_R3601
160.2
RHH5258_R3630
227.8
RHH5287_R3659
195.0
Non-Vd2 gdTCR nTPM: 236.5
Samples: 4
Max nTPM: 255.4
Min nTPM: 201.3
RHH5235_R3607
241.4
RHH5264_R3636
255.4
RHH5207_R3578
247.9
RHH5299_R3665
201.3
T-reg nTPM: 234.0
Samples: 4
Max nTPM: 323.5
Min nTPM: 185.3
RHH5301_R3667
185.3
RHH5237_R3609
323.5
RHH5266_R3638
206.6
RHH5209_R3580
220.5
Terminal effector memory CD4 T-cell nTPM: 249.2
Samples: 2
Max nTPM: 279.5
Min nTPM: 218.9
RHH5243_R3615
279.5
RHH5272_R3644
218.9
Terminal effector memory CD8 T-cell nTPM: 239.8
Samples: 4
Max nTPM: 279.4
Min nTPM: 195.4
RHH5232_R3604
243.6
RHH5204_R3575
195.4
RHH5261_R3633
279.4
RHH5296_R3662
240.8
Vd2 gdTCR nTPM: 215.3
Samples: 4
Max nTPM: 265.1
Min nTPM: 168.3
RHH5234_R3606
208.0
RHH5206_R3577
219.6
RHH5263_R3635
265.1
RHH5298_R3664
168.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.