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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
27.1
nTPM
Monaco:
126.1
nTPM
Schmiedel:
69.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.1
HPA sample
nTPM
gdT-cell nTPM: 20.7
Samples: 6
Max nTPM: 30.4
Min nTPM: 15.0
P10809_1007
17.7
P10809_1022
18.1
P10809_1041
16.3
P10809_1060
30.4
P10809_1077
26.8
P10809_1098
15.0
MAIT T-cell nTPM: 23.4
Samples: 6
Max nTPM: 31.5
Min nTPM: 13.1
P10809_1006
18.2
P10809_1024
21.8
P10809_1043
24.8
P10809_1062
30.8
P10809_1083
31.5
P10809_1097
13.1
Memory CD4 T-cell nTPM: 25.3
Samples: 6
Max nTPM: 33.1
Min nTPM: 20.5
P10809_1014
20.5
P10809_1026
22.3
P10809_1045
27.7
P10809_1064
33.1
P10809_1086
27.4
P10809_1113
21.0
Memory CD8 T-cell nTPM: 22.1
Samples: 5
Max nTPM: 33.8
Min nTPM: 12.3
P10809_1012
12.3
P10809_1027
18.8
P10809_1046
24.2
P10809_1065
33.8
P10809_1111
21.2
Naive CD4 T-cell nTPM: 27.1
Samples: 6
Max nTPM: 39.4
Min nTPM: 17.6
P10809_1015
17.6
P10809_1030
30.8
P10809_1049
39.4
P10809_1068
25.1
P10809_1085
30.3
P10809_1112
19.5
Naive CD8 T-cell nTPM: 26.6
Samples: 6
Max nTPM: 39.7
Min nTPM: 11.5
P10809_1016
21.9
P10809_1031
39.7
P10809_1050
37.0
P10809_1069
22.1
P10809_1087
27.5
P10809_1110
11.5
T-reg nTPM: 19.8
Samples: 6
Max nTPM: 28.4
Min nTPM: 12.3
P10809_1018
12.3
P10809_1037
23.6
P10809_1056
20.9
P10809_1075
28.4
P10809_1094
15.1
P10809_1106
18.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
126.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 120.0
Samples: 4
Max nTPM: 140.7
Min nTPM: 82.9
RHH5202_R3573
131.9
RHH5230_R3602
140.7
RHH5259_R3631
82.9
RHH5288_R3660
124.3
Effector memory CD8 T-cell nTPM: 110.3
Samples: 4
Max nTPM: 143.7
Min nTPM: 78.0
RHH5203_R3574
108.8
RHH5231_R3603
110.6
RHH5260_R3632
78.0
RHH5289_R3661
143.7
MAIT T-cell nTPM: 108.4
Samples: 4
Max nTPM: 128.5
Min nTPM: 98.8
RHH5233_R3605
128.5
RHH5205_R3576
99.6
RHH5262_R3634
98.8
RHH5297_R3663
106.6
Memory CD4 T-cell TFH nTPM: 119.3
Samples: 4
Max nTPM: 139.4
Min nTPM: 98.7
RHH5300_R3666
98.7
RHH5236_R3608
124.4
RHH5265_R3637
139.4
RHH5208_R3579
114.5
Memory CD4 T-cell Th1 nTPM: 108.2
Samples: 4
Max nTPM: 120.7
Min nTPM: 93.5
RHH5210_R3581
120.7
RHH5302_R3668
118.4
RHH5238_R3610
93.5
RHH5267_R3639
100.0
Memory CD4 T-cell Th1/Th17 nTPM: 90.3
Samples: 4
Max nTPM: 100.2
Min nTPM: 78.9
RHH5303_R3669
99.5
RHH5211_R3582
78.9
RHH5239_R3611
82.6
RHH5268_R3640
100.2
Memory CD4 T-cell Th17 nTPM: 111.5
Samples: 4
Max nTPM: 120.6
Min nTPM: 85.8
RHH5304_R3670
120.6
RHH5212_R3583
120.4
RHH5240_R3612
119.0
RHH5269_R3641
85.8
Memory CD4 T-cell Th2 nTPM: 126.2
Samples: 4
Max nTPM: 174.6
Min nTPM: 101.2
RHH5305_R3671
101.2
RHH5213_R3584
112.1
RHH5241_R3613
174.6
RHH5270_R3642
116.7
Naive CD4 T-cell nTPM: 123.2
Samples: 4
Max nTPM: 139.4
Min nTPM: 106.1
RHH5306_R3672
106.1
RHH5214_R3585
116.8
RHH5242_R3614
139.4
RHH5271_R3643
130.5
Naive CD8 T-cell nTPM: 115.4
Samples: 4
Max nTPM: 133.8
Min nTPM: 73.7
RHH5201_R3572
133.8
RHH5229_R3601
73.7
RHH5258_R3630
124.1
RHH5287_R3659
129.9
Non-Vd2 gdTCR nTPM: 119.4
Samples: 4
Max nTPM: 162.7
Min nTPM: 98.3
RHH5235_R3607
162.7
RHH5264_R3636
98.9
RHH5207_R3578
117.6
RHH5299_R3665
98.3
T-reg nTPM: 124.4
Samples: 4
Max nTPM: 187.7
Min nTPM: 97.8
RHH5301_R3667
97.8
RHH5237_R3609
187.7
RHH5266_R3638
114.0
RHH5209_R3580
97.9
Terminal effector memory CD4 T-cell nTPM: 106.1
Samples: 2
Max nTPM: 109.9
Min nTPM: 102.3
RHH5243_R3615
102.3
RHH5272_R3644
109.9
Terminal effector memory CD8 T-cell nTPM: 103.7
Samples: 4
Max nTPM: 130.6
Min nTPM: 90.6
RHH5232_R3604
130.6
RHH5204_R3575
91.4
RHH5261_R3633
102.2
RHH5296_R3662
90.6
Vd2 gdTCR nTPM: 101.9
Samples: 4
Max nTPM: 126.4
Min nTPM: 86.9
RHH5234_R3606
126.4
RHH5206_R3577
88.6
RHH5263_R3635
105.8
RHH5298_R3664
86.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
