We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
62.0
nTPM
Monaco:
48.4
nTPM
Schmiedel:
13.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
62.0
HPA sample
nTPM
gdT-cell nTPM: 62.0
Samples: 6
Max nTPM: 96.1
Min nTPM: 37.7
P10809_1007
37.7
P10809_1022
96.1
P10809_1041
60.4
P10809_1060
53.3
P10809_1077
61.9
P10809_1098
62.7
MAIT T-cell nTPM: 55.6
Samples: 6
Max nTPM: 78.6
Min nTPM: 37.0
P10809_1006
37.0
P10809_1024
78.6
P10809_1043
69.3
P10809_1062
58.9
P10809_1083
38.3
P10809_1097
51.2
Memory CD4 T-cell nTPM: 53.3
Samples: 6
Max nTPM: 61.6
Min nTPM: 34.5
P10809_1014
34.5
P10809_1026
61.6
P10809_1045
60.9
P10809_1064
56.3
P10809_1086
57.7
P10809_1113
48.9
Memory CD8 T-cell nTPM: 62.0
Samples: 5
Max nTPM: 90.8
Min nTPM: 36.3
P10809_1012
36.3
P10809_1027
64.4
P10809_1046
90.8
P10809_1065
62.4
P10809_1111
56.1
Naive CD4 T-cell nTPM: 47.9
Samples: 6
Max nTPM: 65.9
Min nTPM: 18.8
P10809_1015
18.8
P10809_1030
45.8
P10809_1049
65.9
P10809_1068
55.9
P10809_1085
61.8
P10809_1112
38.9
Naive CD8 T-cell nTPM: 54.9
Samples: 6
Max nTPM: 71.0
Min nTPM: 24.8
P10809_1016
24.8
P10809_1031
59.0
P10809_1050
66.2
P10809_1069
71.0
P10809_1087
64.1
P10809_1110
44.4
T-reg nTPM: 59.8
Samples: 6
Max nTPM: 107.2
Min nTPM: 23.4
P10809_1018
44.2
P10809_1037
23.4
P10809_1056
107.2
P10809_1075
51.6
P10809_1094
72.9
P10809_1106
59.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
48.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 28.0
Samples: 4
Max nTPM: 46.4
Min nTPM: 15.8
RHH5202_R3573
46.4
RHH5230_R3602
20.2
RHH5259_R3631
15.8
RHH5288_R3660
29.7
Effector memory CD8 T-cell nTPM: 48.4
Samples: 4
Max nTPM: 59.1
Min nTPM: 40.3
RHH5203_R3574
59.1
RHH5231_R3603
40.3
RHH5260_R3632
41.3
RHH5289_R3661
52.9
MAIT T-cell nTPM: 26.9
Samples: 4
Max nTPM: 30.4
Min nTPM: 23.5
RHH5233_R3605
26.5
RHH5205_R3576
27.3
RHH5262_R3634
23.5
RHH5297_R3663
30.4
Memory CD4 T-cell TFH nTPM: 17.3
Samples: 4
Max nTPM: 27.6
Min nTPM: 5.8
RHH5300_R3666
27.1
RHH5236_R3608
5.8
RHH5265_R3637
27.6
RHH5208_R3579
8.8
Memory CD4 T-cell Th1 nTPM: 16.2
Samples: 4
Max nTPM: 19.0
Min nTPM: 9.4
RHH5210_R3581
18.6
RHH5302_R3668
9.4
RHH5238_R3610
17.8
RHH5267_R3639
19.0
Memory CD4 T-cell Th1/Th17 nTPM: 19.4
Samples: 4
Max nTPM: 25.1
Min nTPM: 14.0
RHH5303_R3669
25.1
RHH5211_R3582
14.0
RHH5239_R3611
16.9
RHH5268_R3640
21.6
Memory CD4 T-cell Th17 nTPM: 23.4
Samples: 4
Max nTPM: 28.6
Min nTPM: 18.3
RHH5304_R3670
28.6
RHH5212_R3583
21.8
RHH5240_R3612
24.9
RHH5269_R3641
18.3
Memory CD4 T-cell Th2 nTPM: 26.8
Samples: 4
Max nTPM: 34.5
Min nTPM: 17.6
RHH5305_R3671
29.1
RHH5213_R3584
26.1
RHH5241_R3613
34.5
RHH5270_R3642
17.6
Naive CD4 T-cell nTPM: 19.3
Samples: 4
Max nTPM: 24.1
Min nTPM: 10.4
RHH5306_R3672
21.3
RHH5214_R3585
24.1
RHH5242_R3614
10.4
RHH5271_R3643
21.2
Naive CD8 T-cell nTPM: 24.6
Samples: 4
Max nTPM: 32.2
Min nTPM: 18.2
RHH5201_R3572
21.5
RHH5229_R3601
26.4
RHH5258_R3630
32.2
RHH5287_R3659
18.2
Non-Vd2 gdTCR nTPM: 31.9
Samples: 4
Max nTPM: 49.5
Min nTPM: 22.4
RHH5235_R3607
22.4
RHH5264_R3636
30.6
RHH5207_R3578
49.5
RHH5299_R3665
25.0
T-reg nTPM: 24.8
Samples: 4
Max nTPM: 28.1
Min nTPM: 17.0
RHH5301_R3667
27.5
RHH5237_R3609
26.6
RHH5266_R3638
28.1
RHH5209_R3580
17.0
Terminal effector memory CD4 T-cell nTPM: 27.8
Samples: 2
Max nTPM: 30.4
Min nTPM: 25.1
RHH5243_R3615
30.4
RHH5272_R3644
25.1
Terminal effector memory CD8 T-cell nTPM: 40.1
Samples: 4
Max nTPM: 49.4
Min nTPM: 23.6
RHH5232_R3604
46.1
RHH5204_R3575
49.4
RHH5261_R3633
23.6
RHH5296_R3662
41.2
Vd2 gdTCR nTPM: 28.0
Samples: 4
Max nTPM: 40.1
Min nTPM: 23.6
RHH5234_R3606
24.3
RHH5206_R3577
40.1
RHH5263_R3635
24.0
RHH5298_R3664
23.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
