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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
44.6
nTPM
Monaco:
208.4
nTPM
Schmiedel:
335.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.6
HPA sample
nTPM
gdT-cell nTPM: 36.0
Samples: 6
Max nTPM: 44.7
Min nTPM: 31.2
P10809_1007
36.2
P10809_1022
38.3
P10809_1041
44.7
P10809_1060
31.7
P10809_1077
31.2
P10809_1098
33.6
MAIT T-cell nTPM: 31.2
Samples: 6
Max nTPM: 36.0
Min nTPM: 23.7
P10809_1006
31.8
P10809_1024
36.0
P10809_1043
33.2
P10809_1062
28.2
P10809_1083
23.7
P10809_1097
34.2
Memory CD4 T-cell nTPM: 29.3
Samples: 6
Max nTPM: 38.7
Min nTPM: 22.4
P10809_1014
30.4
P10809_1026
38.7
P10809_1045
24.2
P10809_1064
22.4
P10809_1086
29.4
P10809_1113
30.4
Memory CD8 T-cell nTPM: 33.6
Samples: 5
Max nTPM: 40.0
Min nTPM: 24.9
P10809_1012
37.6
P10809_1027
25.7
P10809_1046
40.0
P10809_1065
24.9
P10809_1111
39.6
Naive CD4 T-cell nTPM: 18.0
Samples: 6
Max nTPM: 21.8
Min nTPM: 12.5
P10809_1015
21.6
P10809_1030
13.4
P10809_1049
12.5
P10809_1068
19.8
P10809_1085
21.8
P10809_1112
18.7
Naive CD8 T-cell nTPM: 24.1
Samples: 6
Max nTPM: 30.2
Min nTPM: 15.5
P10809_1016
20.9
P10809_1031
22.4
P10809_1050
30.2
P10809_1069
28.0
P10809_1087
27.7
P10809_1110
15.5
T-reg nTPM: 44.7
Samples: 6
Max nTPM: 60.8
Min nTPM: 23.3
P10809_1018
60.8
P10809_1037
23.3
P10809_1056
46.6
P10809_1075
39.7
P10809_1094
51.7
P10809_1106
45.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
208.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 100.1
Samples: 4
Max nTPM: 131.4
Min nTPM: 66.4
RHH5202_R3573
104.7
RHH5230_R3602
131.4
RHH5259_R3631
66.4
RHH5288_R3660
97.8
Effector memory CD8 T-cell nTPM: 143.0
Samples: 4
Max nTPM: 179.1
Min nTPM: 110.6
RHH5203_R3574
147.9
RHH5231_R3603
134.3
RHH5260_R3632
179.1
RHH5289_R3661
110.6
MAIT T-cell nTPM: 134.4
Samples: 4
Max nTPM: 169.4
Min nTPM: 102.4
RHH5233_R3605
150.5
RHH5205_R3576
169.4
RHH5262_R3634
102.4
RHH5297_R3663
115.1
Memory CD4 T-cell TFH nTPM: 73.9
Samples: 4
Max nTPM: 93.0
Min nTPM: 40.8
RHH5300_R3666
89.5
RHH5236_R3608
72.2
RHH5265_R3637
93.0
RHH5208_R3579
40.8
Memory CD4 T-cell Th1 nTPM: 101.0
Samples: 4
Max nTPM: 128.6
Min nTPM: 84.0
RHH5210_R3581
84.0
RHH5302_R3668
103.1
RHH5238_R3610
88.3
RHH5267_R3639
128.6
Memory CD4 T-cell Th1/Th17 nTPM: 97.8
Samples: 4
Max nTPM: 115.0
Min nTPM: 73.1
RHH5303_R3669
99.0
RHH5211_R3582
115.0
RHH5239_R3611
73.1
RHH5268_R3640
104.1
Memory CD4 T-cell Th17 nTPM: 93.5
Samples: 4
Max nTPM: 104.3
Min nTPM: 84.0
RHH5304_R3670
104.3
RHH5212_R3583
84.0
RHH5240_R3612
93.4
RHH5269_R3641
92.2
Memory CD4 T-cell Th2 nTPM: 91.9
Samples: 4
Max nTPM: 105.3
Min nTPM: 76.6
RHH5305_R3671
76.6
RHH5213_R3584
105.3
RHH5241_R3613
81.8
RHH5270_R3642
103.9
Naive CD4 T-cell nTPM: 69.9
Samples: 4
Max nTPM: 83.8
Min nTPM: 54.7
RHH5306_R3672
73.3
RHH5214_R3585
54.7
RHH5242_R3614
67.8
RHH5271_R3643
83.8
Naive CD8 T-cell nTPM: 41.0
Samples: 4
Max nTPM: 59.7
Min nTPM: 13.7
RHH5201_R3572
13.7
RHH5229_R3601
59.7
RHH5258_R3630
44.9
RHH5287_R3659
45.7
Non-Vd2 gdTCR nTPM: 208.4
Samples: 4
Max nTPM: 288.3
Min nTPM: 145.8
RHH5235_R3607
225.9
RHH5264_R3636
173.7
RHH5207_R3578
288.3
RHH5299_R3665
145.8
T-reg nTPM: 97.2
Samples: 4
Max nTPM: 116.0
Min nTPM: 58.6
RHH5301_R3667
99.4
RHH5237_R3609
58.6
RHH5266_R3638
114.9
RHH5209_R3580
116.0
Terminal effector memory CD4 T-cell nTPM: 150.1
Samples: 2
Max nTPM: 160.6
Min nTPM: 139.5
RHH5243_R3615
160.6
RHH5272_R3644
139.5
Terminal effector memory CD8 T-cell nTPM: 164.4
Samples: 4
Max nTPM: 181.8
Min nTPM: 120.8
RHH5232_R3604
180.9
RHH5204_R3575
173.9
RHH5261_R3633
181.8
RHH5296_R3662
120.8
Vd2 gdTCR nTPM: 151.8
Samples: 4
Max nTPM: 179.7
Min nTPM: 111.7
RHH5234_R3606
152.2
RHH5206_R3577
163.6
RHH5263_R3635
179.7
RHH5298_R3664
111.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
