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CLXN
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PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CLXN
Synonyms EFCAB1, FLJ11767, ODAD5
Gene descriptioni

Full gene name according to HGNC.

Calaxin
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 8
Cytoband q11.21
Chromosome location (bp) 48710789 - 48735311
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000034239 (version 109)
Entrez gene 79645
HGNC HGNC:25678
UniProt Q9HAE3 (UniProt - Evidence at transcript level)
neXtProt NX_Q9HAE3
GeneCards CLXN
Antibodypedia CLXN antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Component of the outer dynein arm-docking complex (ODA-DC) that mediates outer dynein arms (ODA) binding onto the doublet microtubule. Seems to regulate the assembly of both ODAs and their axonemal docking complex onto ciliary microtubules (By similarity). Regulates ciliary and flagellar motility and is required for cilia-driven determination of body laterality (By similarity).... show less
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Calcium, Metal-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable calcium ion binding activity. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CLXN-201
ENSP00000262103
ENST00000262103
Q9HAE3
[Direct mapping] Calaxin
Show all
A0A024R7U5
[Target identity:100%; Query identity:100%] EF-hand calcium binding domain 1, isoform CRA_b
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0003341 [cilium movement]
GO:0003352 [regulation of cilium movement]
GO:0005509 [calcium ion binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005929 [cilium]
GO:0036158 [outer dynein arm assembly]
GO:0042995 [cell projection]
GO:0046872 [metal ion binding]
GO:1901317 [regulation of flagellated sperm motility]
Show all
211 aa
24.5 kDa
No 0
CLXN-202
ENSP00000400873
ENST00000433756
Q9HAE3
[Direct mapping] Calaxin
Show all
A0A024R7U7
[Target identity:100%; Query identity:100%] EF-hand calcium binding domain 1, isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0003341 [cilium movement]
GO:0003352 [regulation of cilium movement]
GO:0005509 [calcium ion binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005929 [cilium]
GO:0036158 [outer dynein arm assembly]
GO:0042995 [cell projection]
GO:0046872 [metal ion binding]
GO:1901317 [regulation of flagellated sperm motility]
Show all
159 aa
18.5 kDa
No 0
CLXN-207
ENSP00000430940
ENST00000522254
H0YC53
[Direct mapping] Calaxin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005509 [calcium ion binding]
GO:0046872 [metal ion binding]
Show all
129 aa
14.8 kDa
No 0
CLXN-208
ENSP00000429644
ENST00000523008
H0YBJ9
[Direct mapping] Calaxin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005509 [calcium ion binding]
GO:0046872 [metal ion binding]
Show all
78 aa
8.9 kDa
No 0
CLXN-209
ENSP00000430765
ENST00000523092
Q9HAE3
[Direct mapping] Calaxin
Show all
A0A024R7U7
[Target identity:100%; Query identity:100%] EF-hand calcium binding domain 1, isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0003341 [cilium movement]
GO:0003352 [regulation of cilium movement]
GO:0005509 [calcium ion binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005929 [cilium]
GO:0036158 [outer dynein arm assembly]
GO:0042995 [cell projection]
GO:0046872 [metal ion binding]
GO:1901317 [regulation of flagellated sperm motility]
Show all
159 aa
18.5 kDa
No 0

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