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IMMUNE CELL B-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cell proteome
B-cells
B-CELLS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA:16661.5 nTPM
Monaco:2126.7 nTPM
Schmiedel:3667.1 TPM

B-CELLS - Annotated protein expression
Pending normal tissue analysis

B-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM 16661.5
HPA sample nTPM
Memory B-cell
nTPM: 16259.9
Samples: 6

Max nTPM: 41367.4
Min nTPM: 9066.2
P10809_1017 9066.2
P10809_1025 12802.7
P10809_1044 41367.4
P10809_1063 11404.8
P10809_1092 10869.5
P10809_1105 12048.7
Naive B-cell
nTPM: 16661.5
Samples: 6

Max nTPM: 27576.8
Min nTPM: 9699.0
P10809_1011 9699.0
P10809_1029 15992.5
P10809_1048 27576.8
P10809_1067 15333.7
P10809_1091 14177.0
P10809_1104 17189.7

B-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max nTPM 2126.7
Monaco sample nTPM
Exhausted memory B-cell
nTPM: 1584.0
Samples: 4

Max nTPM: 3101.4
Min nTPM: 423.4
RHH5310_R3677 1340.9
RHH5218_R3590 423.4
RHH5247_R3619 3101.4
RHH5276_R3648 1470.1
Naive B-cell
nTPM: 1197.5
Samples: 4

Max nTPM: 2123.1
Min nTPM: 619.9
RHH5308_R3675 1176.8
RHH5216_R3588 619.9
RHH5245_R3617 2123.1
RHH5274_R3646 870.0
Non-switched memory B-cell
nTPM: 694.2
Samples: 4

Max nTPM: 1020.4
Min nTPM: 438.2
RHH5309_R3676 803.4
RHH5217_R3589 438.2
RHH5246_R3618 514.8
RHH5275_R3647 1020.4
Plasmablast
nTPM: 2126.7
Samples: 4

Max nTPM: 2552.8
Min nTPM: 1493.7
RHH5312_R3679 2552.8
RHH5220_R3592 1493.7
RHH5249_R3621 2255.8
RHH5278_R3650 2204.6
Switched memory B-cell
nTPM: 765.7
Samples: 4

Max nTPM: 1038.4
Min nTPM: 449.6
RHH5311_R3678 1038.4
RHH5219_R3591 698.0
RHH5248_R3620 449.6
RHH5277_R3649 876.9

B-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max TPM 3667.1
Schmiedel sample id TPM
Naive B-cell
TPM: 3667.1
Samples: 91

Max TPM: 5151.3
Min TPM: 1705.5
B_CELL_NAIVE_1 5151.3
B_CELL_NAIVE_2 5052.5
B_CELL_NAIVE_3 4968.8
B_CELL_NAIVE_4 4736.6
B_CELL_NAIVE_5 4720.2
B_CELL_NAIVE_6 4695.4
B_CELL_NAIVE_7 4691.4
B_CELL_NAIVE_8 4626.5
B_CELL_NAIVE_9 4623.2
B_CELL_NAIVE_10 4513.0
B_CELL_NAIVE_11 4512.7
B_CELL_NAIVE_12 4432.6
B_CELL_NAIVE_13 4328.0
B_CELL_NAIVE_14 4323.4
B_CELL_NAIVE_15 4315.0
B_CELL_NAIVE_16 4311.1
B_CELL_NAIVE_17 4229.8
B_CELL_NAIVE_18 4178.8
B_CELL_NAIVE_19 4160.6
B_CELL_NAIVE_20 4146.6
B_CELL_NAIVE_21 4118.1
B_CELL_NAIVE_22 4103.1
B_CELL_NAIVE_23 4102.9
B_CELL_NAIVE_24 4076.8
B_CELL_NAIVE_25 4070.0
B_CELL_NAIVE_26 4069.4
B_CELL_NAIVE_27 4044.4
B_CELL_NAIVE_28 4012.8
B_CELL_NAIVE_29 3980.5
B_CELL_NAIVE_30 3977.8
B_CELL_NAIVE_31 3935.4
B_CELL_NAIVE_32 3933.1
B_CELL_NAIVE_33 3916.3
B_CELL_NAIVE_34 3911.9
B_CELL_NAIVE_35 3901.9
B_CELL_NAIVE_36 3900.4
B_CELL_NAIVE_37 3898.5
B_CELL_NAIVE_38 3868.5
B_CELL_NAIVE_39 3862.9
B_CELL_NAIVE_40 3860.7
B_CELL_NAIVE_41 3850.1
B_CELL_NAIVE_42 3844.2
B_CELL_NAIVE_43 3837.3
B_CELL_NAIVE_44 3836.8
B_CELL_NAIVE_45 3826.6
B_CELL_NAIVE_46 3798.9
B_CELL_NAIVE_47 3788.7
B_CELL_NAIVE_48 3787.0
B_CELL_NAIVE_49 3760.2
B_CELL_NAIVE_50 3748.2
B_CELL_NAIVE_51 3737.7
B_CELL_NAIVE_52 3720.5
B_CELL_NAIVE_53 3669.1
B_CELL_NAIVE_54 3622.5
B_CELL_NAIVE_55 3565.3
B_CELL_NAIVE_56 3558.8
B_CELL_NAIVE_57 3533.1
B_CELL_NAIVE_58 3475.0
B_CELL_NAIVE_59 3451.6
B_CELL_NAIVE_60 3448.7
B_CELL_NAIVE_61 3440.2
B_CELL_NAIVE_62 3386.0
B_CELL_NAIVE_63 3371.8
B_CELL_NAIVE_64 3353.4
B_CELL_NAIVE_65 3333.4
B_CELL_NAIVE_66 3308.7
B_CELL_NAIVE_67 3292.0
B_CELL_NAIVE_68 3258.2
B_CELL_NAIVE_69 3248.2
B_CELL_NAIVE_70 3245.5
B_CELL_NAIVE_71 3171.1
B_CELL_NAIVE_72 3165.1
B_CELL_NAIVE_73 3138.2
B_CELL_NAIVE_74 3101.8
B_CELL_NAIVE_75 3086.2
B_CELL_NAIVE_76 3056.0
B_CELL_NAIVE_77 3023.2
B_CELL_NAIVE_78 2977.6
B_CELL_NAIVE_79 2977.1
B_CELL_NAIVE_80 2834.1
B_CELL_NAIVE_81 2765.8
B_CELL_NAIVE_82 2765.3
B_CELL_NAIVE_83 2630.0
B_CELL_NAIVE_84 2601.6
B_CELL_NAIVE_85 2439.7
B_CELL_NAIVE_86 2431.3
B_CELL_NAIVE_87 2306.1
B_CELL_NAIVE_88 2193.9
B_CELL_NAIVE_89 2021.6
B_CELL_NAIVE_90 1955.7
B_CELL_NAIVE_91 1705.5
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