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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
16.3
nTPM
Monaco:
226.9
nTPM
Schmiedel:
455.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.3
HPA sample
nTPM
gdT-cell nTPM: 16.3
Samples: 6
Max nTPM: 26.2
Min nTPM: 9.0
P10809_1007
14.0
P10809_1022
13.6
P10809_1041
9.0
P10809_1060
24.1
P10809_1077
26.2
P10809_1098
11.1
MAIT T-cell nTPM: 10.5
Samples: 6
Max nTPM: 15.1
Min nTPM: 4.3
P10809_1006
9.0
P10809_1024
7.3
P10809_1043
4.3
P10809_1062
13.5
P10809_1083
15.1
P10809_1097
13.7
Memory CD4 T-cell nTPM: 13.4
Samples: 6
Max nTPM: 18.0
Min nTPM: 7.7
P10809_1014
12.5
P10809_1026
7.7
P10809_1045
12.7
P10809_1064
15.0
P10809_1086
18.0
P10809_1113
14.6
Memory CD8 T-cell nTPM: 12.6
Samples: 5
Max nTPM: 15.7
Min nTPM: 10.4
P10809_1012
12.2
P10809_1027
11.2
P10809_1046
10.4
P10809_1065
15.7
P10809_1111
13.4
Naive CD4 T-cell nTPM: 7.0
Samples: 6
Max nTPM: 9.6
Min nTPM: 4.5
P10809_1015
9.6
P10809_1030
5.5
P10809_1049
4.5
P10809_1068
7.7
P10809_1085
7.3
P10809_1112
7.1
Naive CD8 T-cell nTPM: 9.9
Samples: 6
Max nTPM: 17.7
Min nTPM: 4.4
P10809_1016
7.2
P10809_1031
7.8
P10809_1050
4.4
P10809_1069
13.7
P10809_1087
17.7
P10809_1110
8.3
T-reg nTPM: 14.8
Samples: 6
Max nTPM: 20.8
Min nTPM: 10.7
P10809_1018
16.7
P10809_1037
18.6
P10809_1056
10.7
P10809_1075
20.8
P10809_1094
11.1
P10809_1106
10.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
226.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 180.8
Samples: 4
Max nTPM: 203.2
Min nTPM: 158.9
RHH5202_R3573
189.2
RHH5230_R3602
171.9
RHH5259_R3631
203.2
RHH5288_R3660
158.9
Effector memory CD8 T-cell nTPM: 220.1
Samples: 4
Max nTPM: 252.5
Min nTPM: 192.7
RHH5203_R3574
239.7
RHH5231_R3603
192.7
RHH5260_R3632
252.5
RHH5289_R3661
195.3
MAIT T-cell nTPM: 159.2
Samples: 4
Max nTPM: 208.4
Min nTPM: 131.4
RHH5233_R3605
208.4
RHH5205_R3576
164.5
RHH5262_R3634
131.4
RHH5297_R3663
132.5
Memory CD4 T-cell TFH nTPM: 212.6
Samples: 4
Max nTPM: 250.0
Min nTPM: 175.7
RHH5300_R3666
175.7
RHH5236_R3608
191.7
RHH5265_R3637
233.1
RHH5208_R3579
250.0
Memory CD4 T-cell Th1 nTPM: 164.9
Samples: 4
Max nTPM: 203.2
Min nTPM: 122.6
RHH5210_R3581
122.6
RHH5302_R3668
171.3
RHH5238_R3610
203.2
RHH5267_R3639
162.6
Memory CD4 T-cell Th1/Th17 nTPM: 168.3
Samples: 4
Max nTPM: 213.3
Min nTPM: 149.3
RHH5303_R3669
149.3
RHH5211_R3582
155.9
RHH5239_R3611
213.3
RHH5268_R3640
154.8
Memory CD4 T-cell Th17 nTPM: 181.8
Samples: 4
Max nTPM: 205.2
Min nTPM: 157.2
RHH5304_R3670
157.2
RHH5212_R3583
168.5
RHH5240_R3612
196.4
RHH5269_R3641
205.2
Memory CD4 T-cell Th2 nTPM: 161.9
Samples: 4
Max nTPM: 175.1
Min nTPM: 148.4
RHH5305_R3671
163.6
RHH5213_R3584
175.1
RHH5241_R3613
160.4
RHH5270_R3642
148.4
Naive CD4 T-cell nTPM: 99.3
Samples: 4
Max nTPM: 134.3
Min nTPM: 65.4
RHH5306_R3672
65.4
RHH5214_R3585
78.4
RHH5242_R3614
134.3
RHH5271_R3643
119.2
Naive CD8 T-cell nTPM: 79.0
Samples: 4
Max nTPM: 90.6
Min nTPM: 64.4
RHH5201_R3572
75.7
RHH5229_R3601
90.6
RHH5258_R3630
85.4
RHH5287_R3659
64.4
Non-Vd2 gdTCR nTPM: 208.6
Samples: 4
Max nTPM: 235.0
Min nTPM: 156.1
RHH5235_R3607
209.0
RHH5264_R3636
235.0
RHH5207_R3578
234.2
RHH5299_R3665
156.1
T-reg nTPM: 129.8
Samples: 4
Max nTPM: 150.1
Min nTPM: 117.7
RHH5301_R3667
120.4
RHH5237_R3609
131.0
RHH5266_R3638
117.7
RHH5209_R3580
150.1
Terminal effector memory CD4 T-cell nTPM: 213.1
Samples: 2
Max nTPM: 224.3
Min nTPM: 201.8
RHH5243_R3615
224.3
RHH5272_R3644
201.8
Terminal effector memory CD8 T-cell nTPM: 226.9
Samples: 4
Max nTPM: 260.1
Min nTPM: 204.3
RHH5232_R3604
230.3
RHH5204_R3575
260.1
RHH5261_R3633
204.3
RHH5296_R3662
213.0
Vd2 gdTCR nTPM: 184.5
Samples: 4
Max nTPM: 240.3
Min nTPM: 117.4
RHH5234_R3606
197.0
RHH5206_R3577
183.1
RHH5263_R3635
240.3
RHH5298_R3664
117.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
