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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
208.8
nTPM
Monaco:
319.9
nTPM
Schmiedel:
80.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
208.8
HPA sample
nTPM
gdT-cell nTPM: 128.7
Samples: 6
Max nTPM: 151.1
Min nTPM: 100.2
P10809_1007
108.7
P10809_1022
133.5
P10809_1041
151.1
P10809_1060
140.6
P10809_1077
100.2
P10809_1098
138.1
MAIT T-cell nTPM: 163.4
Samples: 6
Max nTPM: 193.4
Min nTPM: 131.5
P10809_1006
131.5
P10809_1024
193.4
P10809_1043
170.4
P10809_1062
161.3
P10809_1083
143.0
P10809_1097
180.6
Memory CD4 T-cell nTPM: 135.6
Samples: 6
Max nTPM: 156.4
Min nTPM: 114.7
P10809_1014
124.4
P10809_1026
141.9
P10809_1045
156.4
P10809_1064
114.7
P10809_1086
124.5
P10809_1113
151.9
Memory CD8 T-cell nTPM: 146.8
Samples: 5
Max nTPM: 178.8
Min nTPM: 117.4
P10809_1012
134.1
P10809_1027
156.6
P10809_1046
147.3
P10809_1065
117.4
P10809_1111
178.8
Naive CD4 T-cell nTPM: 121.8
Samples: 6
Max nTPM: 128.6
Min nTPM: 111.3
P10809_1015
127.1
P10809_1030
111.3
P10809_1049
122.1
P10809_1068
119.6
P10809_1085
122.2
P10809_1112
128.6
Naive CD8 T-cell nTPM: 115.0
Samples: 6
Max nTPM: 126.6
Min nTPM: 101.9
P10809_1016
125.9
P10809_1031
105.2
P10809_1050
113.7
P10809_1069
126.6
P10809_1087
116.4
P10809_1110
101.9
T-reg nTPM: 208.7
Samples: 6
Max nTPM: 247.2
Min nTPM: 161.4
P10809_1018
161.4
P10809_1037
182.3
P10809_1056
247.2
P10809_1075
219.2
P10809_1094
208.6
P10809_1106
233.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
319.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 238.5
Samples: 4
Max nTPM: 420.4
Min nTPM: 131.7
RHH5202_R3573
222.8
RHH5230_R3602
131.7
RHH5259_R3631
178.9
RHH5288_R3660
420.4
Effector memory CD8 T-cell nTPM: 197.4
Samples: 4
Max nTPM: 269.2
Min nTPM: 135.0
RHH5203_R3574
269.2
RHH5231_R3603
219.9
RHH5260_R3632
135.0
RHH5289_R3661
165.5
MAIT T-cell nTPM: 255.3
Samples: 4
Max nTPM: 407.9
Min nTPM: 131.0
RHH5233_R3605
261.9
RHH5205_R3576
131.0
RHH5262_R3634
220.2
RHH5297_R3663
407.9
Memory CD4 T-cell TFH nTPM: 233.9
Samples: 4
Max nTPM: 300.1
Min nTPM: 185.2
RHH5300_R3666
300.1
RHH5236_R3608
252.3
RHH5265_R3637
198.0
RHH5208_R3579
185.2
Memory CD4 T-cell Th1 nTPM: 209.2
Samples: 4
Max nTPM: 360.7
Min nTPM: 145.8
RHH5210_R3581
171.9
RHH5302_R3668
360.7
RHH5238_R3610
145.8
RHH5267_R3639
158.2
Memory CD4 T-cell Th1/Th17 nTPM: 224.4
Samples: 4
Max nTPM: 368.5
Min nTPM: 98.6
RHH5303_R3669
368.5
RHH5211_R3582
277.8
RHH5239_R3611
98.6
RHH5268_R3640
152.6
Memory CD4 T-cell Th17 nTPM: 148.1
Samples: 4
Max nTPM: 194.1
Min nTPM: 93.3
RHH5304_R3670
187.5
RHH5212_R3583
194.1
RHH5240_R3612
117.6
RHH5269_R3641
93.3
Memory CD4 T-cell Th2 nTPM: 210.9
Samples: 4
Max nTPM: 293.8
Min nTPM: 158.3
RHH5305_R3671
225.8
RHH5213_R3584
165.6
RHH5241_R3613
293.8
RHH5270_R3642
158.3
Naive CD4 T-cell nTPM: 196.7
Samples: 4
Max nTPM: 233.0
Min nTPM: 135.2
RHH5306_R3672
233.0
RHH5214_R3585
225.3
RHH5242_R3614
193.2
RHH5271_R3643
135.2
Naive CD8 T-cell nTPM: 162.8
Samples: 4
Max nTPM: 215.1
Min nTPM: 84.7
RHH5201_R3572
193.6
RHH5229_R3601
84.7
RHH5258_R3630
215.1
RHH5287_R3659
157.9
Non-Vd2 gdTCR nTPM: 184.6
Samples: 4
Max nTPM: 234.9
Min nTPM: 116.6
RHH5235_R3607
116.6
RHH5264_R3636
212.4
RHH5207_R3578
174.4
RHH5299_R3665
234.9
T-reg nTPM: 223.3
Samples: 4
Max nTPM: 365.2
Min nTPM: 130.0
RHH5301_R3667
365.2
RHH5237_R3609
226.0
RHH5266_R3638
130.0
RHH5209_R3580
172.0
Terminal effector memory CD4 T-cell nTPM: 145.1
Samples: 2
Max nTPM: 218.0
Min nTPM: 72.2
RHH5243_R3615
72.2
RHH5272_R3644
218.0
Terminal effector memory CD8 T-cell nTPM: 230.6
Samples: 4
Max nTPM: 306.7
Min nTPM: 138.8
RHH5232_R3604
211.4
RHH5204_R3575
306.7
RHH5261_R3633
138.8
RHH5296_R3662
265.5
Vd2 gdTCR nTPM: 319.9
Samples: 4
Max nTPM: 462.1
Min nTPM: 205.3
RHH5234_R3606
283.0
RHH5206_R3577
329.3
RHH5263_R3635
205.3
RHH5298_R3664
462.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.