HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:32.7 nTPM
HPA Brain:26.3 nTPM
GTEx:32.7 nTPM
FANTOM5:20.2 Scaled Tags Per Million
Pig:51.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030449
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.3
Sample id Sample description nTPM
Hippocampus
nTPM: 20.0
1855 Male, age 76, left hemisphere 24.6
1898 Male, age 80, left hemisphere 22.8
2621 Female, age 67, right hemisphere 20.2
2148 Female, age 91, left hemisphere 19.3
1911 Female, age 85, right hemisphere 19.0
2529 Female, age 94, left hemisphere 14.2
Dentate gyrus
nTPM: 22.0
1927 Female, age 91, both hemispheres 27.2
2010 Male, age 76, both hemispheres 24.0
2246 Female, age 85, both hemispheres 23.1
2530 Female, age 94, left hemisphere 21.3
2528 Male, age 74, both hemispheres 18.4
2531 Female, age 67, both hemispheres 18.2
Entorhinal gyrus
nTPM: 20.9
1938 Female, age 85, left hemisphere 26.1
2613 Female, age 94, left hemisphere 21.3
2764 Male, age 80, right hemisphere 20.8
2686 Male, age 75, right hemisphere 20.7
1787 Male, age 76, left hemisphere 19.8
2117 Female, age 91, right hemisphere 16.8
Hippocampus, CA1
nTPM: 26.3
2749 Male, age 80, left hemisphere 37.3
1873 Female, age 85, both hemispheres 26.9
2527 Male, age 74, both hemispheres 24.5
2045 Male, age 76, both hemispheres 24.1
2082 Female, age 91, right hemisphere 18.6
Hippocampus, CA2
nTPM: 20.5
1892 Male, age 76, both hemispheres 26.5
2437 Female, age 94, left hemisphere 21.5
1963 Male, age 80, left hemisphere 20.6
1940 Female, age 85, left hemisphere 19.7
2113 Female, age 91, right hemisphere 17.3
2249 Male, age 74, both hemispheres 17.3
Hippocampus, CA3
nTPM: 23.3
1867 Male, age 76, both hemispheres 27.6
2137 Male, age 80, left hemisphere 27.4
2620 Female, age 94, left hemisphere 24.5
2861 Female, age 67, both hemispheres 20.3
2436 Male, age 74, both hemispheres 20.1
1891 Female, age 85, both hemispheres 19.7
Parahippocampal cortex
nTPM: 20.6
1933 Female, age 85, both hemispheres 25.8
2532 Female, age 72, left hemisphere 22.1
2250 Female, age 67, right hemisphere 21.8
1850 Male, age 80, both hemispheres 21.2
2622 Female, age 67, right hemisphere 21.0
2245 Female, age 91, both hemispheres 20.6
2693 Female, age 94, both hemispheres 19.5
1990 Female, age 91, right hemisphere 18.1
2018 Male, age 76, both hemispheres 18.1
2692 Male, age 74, both hemispheres 17.2
Perirhinal gyrus
nTPM: 22.6
1847 Female, age 91, left hemisphere 26.1
1794 Male, age 80, right hemisphere 24.9
1841 Female, age 85, right hemisphere 24.0
2521 Female, age 94, right hemisphere 19.8
2848 Male, age 76, right hemisphere 18.3
Subiculum
nTPM: 17.8
2042 Male, age 76, both hemispheres 25.0
1977 Female, age 85, both hemispheres 21.4
2619 Male, age 74, both hemispheres 16.9
1901 Male, age 80, both hemispheres 16.5
2729 Female, age 91, right hemisphere 16.1
2438 Female, age 94, left hemisphere 11.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.7
Samples: 197

Max nTPM: 76.9
Min nTPM: 13.7
Std nTPM: 10.4
Median nTPM: 31.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 76.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 64.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 61.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 59.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 57.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 57.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 57.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 57.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 55.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 53.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 50.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.2
FF:10169-103B7 60 years, female 30.1
FF:10153-102I9 76 years, female 10.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.6
Pig sample Sample description nTPM
Subiculum
nTPM: 43.7
Samples: 4

Max nTPM: 57.8
Min nTPM: 36.2
Sample A Female 57.8
Sample B Female 40.1
Sample C Male 36.2
Sample D Male 40.6
Dorsal hippocampus
nTPM: 51.6
Samples: 4

Max nTPM: 71.0
Min nTPM: 41.7
Sample A Female 71.0
Sample B Female 51.6
Sample C Male 41.7
Sample D Male 42.0
Entorhinal cortex
nTPM: 42.4
Samples: 4

Max nTPM: 54.7
Min nTPM: 30.3
Sample A Female 43.0
Sample B Female 54.7
Sample C Male 41.7
Sample D Male 30.3
Ventral hippocampus
nTPM: 43.6
Samples: 4

Max nTPM: 49.2
Min nTPM: 37.2
Sample A Female 49.2
Sample B Female 37.2
Sample C Male 40.7
Sample D Male 47.3

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