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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
55.9
nTPM
Monaco:
13.4
nTPM
Schmiedel:
21.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
55.9
HPA sample
nTPM
gdT-cell nTPM: 33.1
Samples: 6
Max nTPM: 42.5
Min nTPM: 26.9
P10809_1007
26.9
P10809_1022
30.8
P10809_1041
33.7
P10809_1060
30.3
P10809_1077
42.5
P10809_1098
34.6
MAIT T-cell nTPM: 42.8
Samples: 6
Max nTPM: 52.7
Min nTPM: 33.1
P10809_1006
33.1
P10809_1024
52.7
P10809_1043
47.9
P10809_1062
40.3
P10809_1083
42.4
P10809_1097
40.1
Memory CD4 T-cell nTPM: 40.5
Samples: 6
Max nTPM: 58.6
Min nTPM: 29.1
P10809_1014
29.1
P10809_1026
58.6
P10809_1045
41.2
P10809_1064
34.5
P10809_1086
39.5
P10809_1113
40.1
Memory CD8 T-cell nTPM: 46.1
Samples: 5
Max nTPM: 65.8
Min nTPM: 36.7
P10809_1012
36.7
P10809_1027
65.8
P10809_1046
38.8
P10809_1065
44.4
P10809_1111
44.8
Naive CD4 T-cell nTPM: 33.1
Samples: 6
Max nTPM: 48.6
Min nTPM: 22.7
P10809_1015
32.7
P10809_1030
30.7
P10809_1049
48.6
P10809_1068
27.7
P10809_1085
22.7
P10809_1112
35.9
Naive CD8 T-cell nTPM: 42.2
Samples: 6
Max nTPM: 48.9
Min nTPM: 37.2
P10809_1016
37.2
P10809_1031
42.7
P10809_1050
48.9
P10809_1069
39.3
P10809_1087
41.8
P10809_1110
43.1
T-reg nTPM: 56.0
Samples: 6
Max nTPM: 74.2
Min nTPM: 47.6
P10809_1018
47.6
P10809_1037
74.2
P10809_1056
58.0
P10809_1075
51.6
P10809_1094
56.1
P10809_1106
48.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
13.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 10.3
Samples: 4
Max nTPM: 11.0
Min nTPM: 8.9
RHH5202_R3573
11.0
RHH5230_R3602
10.9
RHH5259_R3631
8.9
RHH5288_R3660
10.4
Effector memory CD8 T-cell nTPM: 7.2
Samples: 4
Max nTPM: 9.7
Min nTPM: 4.7
RHH5203_R3574
4.7
RHH5231_R3603
9.7
RHH5260_R3632
8.6
RHH5289_R3661
5.6
MAIT T-cell nTPM: 11.8
Samples: 4
Max nTPM: 15.2
Min nTPM: 7.1
RHH5233_R3605
7.1
RHH5205_R3576
15.2
RHH5262_R3634
11.6
RHH5297_R3663
13.4
Memory CD4 T-cell TFH nTPM: 11.2
Samples: 4
Max nTPM: 13.6
Min nTPM: 9.9
RHH5300_R3666
10.7
RHH5236_R3608
13.6
RHH5265_R3637
10.7
RHH5208_R3579
9.9
Memory CD4 T-cell Th1 nTPM: 13.4
Samples: 4
Max nTPM: 25.5
Min nTPM: 4.1
RHH5210_R3581
4.1
RHH5302_R3668
25.5
RHH5238_R3610
12.7
RHH5267_R3639
11.1
Memory CD4 T-cell Th1/Th17 nTPM: 10.8
Samples: 4
Max nTPM: 18.5
Min nTPM: 5.4
RHH5303_R3669
18.5
RHH5211_R3582
5.9
RHH5239_R3611
5.4
RHH5268_R3640
13.4
Memory CD4 T-cell Th17 nTPM: 12.4
Samples: 4
Max nTPM: 19.1
Min nTPM: 8.2
RHH5304_R3670
12.7
RHH5212_R3583
19.1
RHH5240_R3612
9.4
RHH5269_R3641
8.2
Memory CD4 T-cell Th2 nTPM: 8.4
Samples: 4
Max nTPM: 13.5
Min nTPM: 4.1
RHH5305_R3671
9.4
RHH5213_R3584
13.5
RHH5241_R3613
6.4
RHH5270_R3642
4.1
Naive CD4 T-cell nTPM: 7.2
Samples: 4
Max nTPM: 13.5
Min nTPM: 1.2
RHH5306_R3672
13.5
RHH5214_R3585
7.8
RHH5242_R3614
1.2
RHH5271_R3643
6.3
Naive CD8 T-cell nTPM: 13.0
Samples: 4
Max nTPM: 16.0
Min nTPM: 9.9
RHH5201_R3572
9.9
RHH5229_R3601
15.1
RHH5258_R3630
16.0
RHH5287_R3659
11.1
Non-Vd2 gdTCR nTPM: 11.6
Samples: 4
Max nTPM: 16.8
Min nTPM: 3.8
RHH5235_R3607
16.8
RHH5264_R3636
3.8
RHH5207_R3578
15.6
RHH5299_R3665
10.1
T-reg nTPM: 9.9
Samples: 4
Max nTPM: 11.3
Min nTPM: 7.4
RHH5301_R3667
11.3
RHH5237_R3609
10.6
RHH5266_R3638
7.4
RHH5209_R3580
10.2
Terminal effector memory CD4 T-cell nTPM: 4.3
Samples: 2
Max nTPM: 8.0
Min nTPM: 0.5
RHH5243_R3615
8.0
RHH5272_R3644
0.5
Terminal effector memory CD8 T-cell nTPM: 11.7
Samples: 4
Max nTPM: 24.8
Min nTPM: 4.4
RHH5232_R3604
4.4
RHH5204_R3575
24.8
RHH5261_R3633
10.9
RHH5296_R3662
6.5
Vd2 gdTCR nTPM: 11.7
Samples: 4
Max nTPM: 18.1
Min nTPM: 4.6
RHH5234_R3606
4.6
RHH5206_R3577
18.1
RHH5263_R3635
8.9
RHH5298_R3664
15.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
