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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
27.5
nTPM
Monaco:
30.2
nTPM
Schmiedel:
69.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.5
HPA sample
nTPM
gdT-cell nTPM: 8.0
Samples: 6
Max nTPM: 11.0
Min nTPM: 6.3
P10809_1007
6.3
P10809_1022
10.3
P10809_1041
11.0
P10809_1060
6.9
P10809_1077
6.6
P10809_1098
7.1
MAIT T-cell nTPM: 27.5
Samples: 6
Max nTPM: 36.2
Min nTPM: 17.3
P10809_1006
17.3
P10809_1024
36.2
P10809_1043
26.2
P10809_1062
26.6
P10809_1083
22.9
P10809_1097
35.6
Memory CD4 T-cell nTPM: 10.1
Samples: 6
Max nTPM: 14.6
Min nTPM: 6.6
P10809_1014
7.6
P10809_1026
11.1
P10809_1045
14.6
P10809_1064
6.6
P10809_1086
9.9
P10809_1113
10.6
Memory CD8 T-cell nTPM: 9.6
Samples: 5
Max nTPM: 13.6
Min nTPM: 7.8
P10809_1012
10.6
P10809_1027
7.8
P10809_1046
13.6
P10809_1065
8.2
P10809_1111
7.9
Naive CD4 T-cell nTPM: 13.5
Samples: 6
Max nTPM: 18.5
Min nTPM: 6.9
P10809_1015
8.8
P10809_1030
18.4
P10809_1049
18.5
P10809_1068
6.9
P10809_1085
17.2
P10809_1112
11.0
Naive CD8 T-cell nTPM: 13.2
Samples: 6
Max nTPM: 23.3
Min nTPM: 6.1
P10809_1016
9.4
P10809_1031
23.3
P10809_1050
15.3
P10809_1069
10.6
P10809_1087
6.1
P10809_1110
14.4
T-reg nTPM: 5.2
Samples: 6
Max nTPM: 9.6
Min nTPM: 2.2
P10809_1018
2.2
P10809_1037
5.5
P10809_1056
9.6
P10809_1075
7.6
P10809_1094
2.4
P10809_1106
3.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
30.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 19.5
Samples: 4
Max nTPM: 34.3
Min nTPM: 8.3
RHH5202_R3573
34.3
RHH5230_R3602
17.1
RHH5259_R3631
8.3
RHH5288_R3660
18.1
Effector memory CD8 T-cell nTPM: 9.7
Samples: 4
Max nTPM: 14.6
Min nTPM: 4.0
RHH5203_R3574
14.6
RHH5231_R3603
7.4
RHH5260_R3632
4.0
RHH5289_R3661
12.7
MAIT T-cell nTPM: 30.2
Samples: 4
Max nTPM: 46.8
Min nTPM: 21.5
RHH5233_R3605
28.3
RHH5205_R3576
46.8
RHH5262_R3634
21.5
RHH5297_R3663
24.2
Memory CD4 T-cell TFH nTPM: 18.4
Samples: 4
Max nTPM: 25.7
Min nTPM: 9.4
RHH5300_R3666
25.7
RHH5236_R3608
16.7
RHH5265_R3637
9.4
RHH5208_R3579
21.8
Memory CD4 T-cell Th1 nTPM: 10.7
Samples: 4
Max nTPM: 14.0
Min nTPM: 5.8
RHH5210_R3581
14.0
RHH5302_R3668
13.3
RHH5238_R3610
5.8
RHH5267_R3639
9.7
Memory CD4 T-cell Th1/Th17 nTPM: 19.5
Samples: 4
Max nTPM: 30.0
Min nTPM: 10.5
RHH5303_R3669
21.7
RHH5211_R3582
30.0
RHH5239_R3611
10.5
RHH5268_R3640
15.6
Memory CD4 T-cell Th17 nTPM: 23.5
Samples: 4
Max nTPM: 44.3
Min nTPM: 8.2
RHH5304_R3670
26.9
RHH5212_R3583
44.3
RHH5240_R3612
8.2
RHH5269_R3641
14.5
Memory CD4 T-cell Th2 nTPM: 13.3
Samples: 4
Max nTPM: 16.5
Min nTPM: 8.9
RHH5305_R3671
8.9
RHH5213_R3584
12.0
RHH5241_R3613
15.6
RHH5270_R3642
16.5
Naive CD4 T-cell nTPM: 17.2
Samples: 4
Max nTPM: 20.9
Min nTPM: 13.0
RHH5306_R3672
14.6
RHH5214_R3585
13.0
RHH5242_R3614
20.9
RHH5271_R3643
20.4
Naive CD8 T-cell nTPM: 20.0
Samples: 4
Max nTPM: 35.7
Min nTPM: 13.7
RHH5201_R3572
35.7
RHH5229_R3601
13.7
RHH5258_R3630
14.9
RHH5287_R3659
15.7
Non-Vd2 gdTCR nTPM: 13.5
Samples: 4
Max nTPM: 20.5
Min nTPM: 10.3
RHH5235_R3607
20.5
RHH5264_R3636
12.1
RHH5207_R3578
10.3
RHH5299_R3665
10.9
T-reg nTPM: 13.4
Samples: 4
Max nTPM: 17.4
Min nTPM: 8.9
RHH5301_R3667
15.5
RHH5237_R3609
17.4
RHH5266_R3638
11.9
RHH5209_R3580
8.9
Terminal effector memory CD4 T-cell nTPM: 4.0
Samples: 2
Max nTPM: 6.6
Min nTPM: 1.4
RHH5243_R3615
1.4
RHH5272_R3644
6.6
Terminal effector memory CD8 T-cell nTPM: 7.6
Samples: 4
Max nTPM: 13.6
Min nTPM: 3.9
RHH5232_R3604
5.8
RHH5204_R3575
13.6
RHH5261_R3633
6.9
RHH5296_R3662
3.9
Vd2 gdTCR nTPM: 19.1
Samples: 4
Max nTPM: 33.4
Min nTPM: 3.0
RHH5234_R3606
33.4
RHH5206_R3577
3.0
RHH5263_R3635
21.9
RHH5298_R3664
18.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
