HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:10.3 nTPM
HPA Brain:21.6 nTPM
GTEx:10.3 nTPM
FANTOM5:27.1 Scaled Tags Per Million
Pig:18.6 nTPM
Mouse:22.6 nTPM
Allen mouse:7.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041164
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.6
Sample id Sample description nTPM
Hippocampus
nTPM: 18.0
2148 Female, age 91, left hemisphere 21.6
1898 Male, age 80, left hemisphere 19.0
2621 Female, age 67, right hemisphere 18.7
2529 Female, age 94, left hemisphere 17.9
1911 Female, age 85, right hemisphere 17.7
1855 Male, age 76, left hemisphere 13.0
Dentate gyrus
nTPM: 20.1
2528 Male, age 74, both hemispheres 23.1
2531 Female, age 67, both hemispheres 23.0
1927 Female, age 91, both hemispheres 20.8
2530 Female, age 94, left hemisphere 18.4
2246 Female, age 85, both hemispheres 17.8
2010 Male, age 76, both hemispheres 17.7
Entorhinal gyrus
nTPM: 21.3
2764 Male, age 80, right hemisphere 26.1
1938 Female, age 85, left hemisphere 23.6
1787 Male, age 76, left hemisphere 22.4
2613 Female, age 94, left hemisphere 21.3
2117 Female, age 91, right hemisphere 19.9
2686 Male, age 75, right hemisphere 14.5
Hippocampus, CA1
nTPM: 18.9
2749 Male, age 80, left hemisphere 24.9
1873 Female, age 85, both hemispheres 18.5
2527 Male, age 74, both hemispheres 18.5
2082 Female, age 91, right hemisphere 17.7
2045 Male, age 76, both hemispheres 15.1
Hippocampus, CA2
nTPM: 20.8
1963 Male, age 80, left hemisphere 27.0
2437 Female, age 94, left hemisphere 22.3
2113 Female, age 91, right hemisphere 20.8
1892 Male, age 76, both hemispheres 19.6
2249 Male, age 74, both hemispheres 17.8
1940 Female, age 85, left hemisphere 17.0
Hippocampus, CA3
nTPM: 18.6
2620 Female, age 94, left hemisphere 21.6
2137 Male, age 80, left hemisphere 21.3
1867 Male, age 76, both hemispheres 20.8
1891 Female, age 85, both hemispheres 17.2
2861 Female, age 67, both hemispheres 16.6
2436 Male, age 74, both hemispheres 14.1
Parahippocampal cortex
nTPM: 19.6
1933 Female, age 85, both hemispheres 25.2
1990 Female, age 91, right hemisphere 23.5
2622 Female, age 67, right hemisphere 21.2
1850 Male, age 80, both hemispheres 20.8
2250 Female, age 67, right hemisphere 20.3
2245 Female, age 91, both hemispheres 19.1
2532 Female, age 72, left hemisphere 19.1
2693 Female, age 94, both hemispheres 17.6
2018 Male, age 76, both hemispheres 17.4
2692 Male, age 74, both hemispheres 11.4
Perirhinal gyrus
nTPM: 21.6
1794 Male, age 80, right hemisphere 28.3
1841 Female, age 85, right hemisphere 21.8
2521 Female, age 94, right hemisphere 20.1
1847 Female, age 91, left hemisphere 19.4
2848 Male, age 76, right hemisphere 18.2
Subiculum
nTPM: 19.8
1977 Female, age 85, both hemispheres 26.1
2438 Female, age 94, left hemisphere 21.5
1901 Male, age 80, both hemispheres 20.2
2729 Female, age 91, right hemisphere 18.4
2619 Male, age 74, both hemispheres 16.6
2042 Male, age 76, both hemispheres 15.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.3
Samples: 197

Max nTPM: 25.2
Min nTPM: 3.1
Std nTPM: 4.0
Median nTPM: 9.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 25.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 25.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 22.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 20.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 20.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 19.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 18.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 18.6
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 18.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 18.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 18.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.1
FF:10169-103B7 60 years, female 29.0
FF:10153-102I9 76 years, female 25.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.6
Pig sample Sample description nTPM
Subiculum
nTPM: 17.8
Samples: 4

Max nTPM: 21.3
Min nTPM: 15.4
Sample A Female 21.3
Sample B Female 16.9
Sample C Male 17.4
Sample D Male 15.4
Dorsal hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 21.4
Min nTPM: 14.9
Sample A Female 21.4
Sample B Female 19.1
Sample C Male 17.5
Sample D Male 14.9
Entorhinal cortex
nTPM: 16.8
Samples: 4

Max nTPM: 17.9
Min nTPM: 16.2
Sample A Female 17.9
Sample B Female 16.5
Sample C Male 16.7
Sample D Male 16.2
Ventral hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 22.3
Min nTPM: 14.7
Sample A Female 18.1
Sample B Female 14.7
Sample C Male 22.3
Sample D Male 19.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 23.5
Min nTPM: 19.8
Sample A Male 20.3
Sample B Male 21.5
Sample C Female 19.8
Sample D Female 23.5
Hippocampal formation
nTPM: 22.7
Samples: 4

Max nTPM: 24.7
Min nTPM: 20.9
Sample A Male 20.9
Sample B Male 24.7
Sample C Female 22.7
Sample D Female 22.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.7
68911011 Antisense, RP_050203_02_E09, Mouse strain C57BL/6J (56 days, male) 7.7

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