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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
217.5
nTPM
Monaco:
226.0
nTPM
Schmiedel:
88.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
217.5
HPA sample
nTPM
gdT-cell nTPM: 136.5
Samples: 6
Max nTPM: 184.1
Min nTPM: 124.2
P10809_1007
124.8
P10809_1022
124.2
P10809_1041
125.4
P10809_1060
133.8
P10809_1077
184.1
P10809_1098
126.5
MAIT T-cell nTPM: 140.6
Samples: 6
Max nTPM: 167.5
Min nTPM: 111.9
P10809_1006
127.3
P10809_1024
162.1
P10809_1043
111.9
P10809_1062
133.1
P10809_1083
167.5
P10809_1097
141.8
Memory CD4 T-cell nTPM: 142.4
Samples: 6
Max nTPM: 166.0
Min nTPM: 121.2
P10809_1014
146.9
P10809_1026
123.9
P10809_1045
142.9
P10809_1064
153.7
P10809_1086
166.0
P10809_1113
121.2
Memory CD8 T-cell nTPM: 144.6
Samples: 5
Max nTPM: 159.1
Min nTPM: 127.4
P10809_1012
127.4
P10809_1027
159.0
P10809_1046
134.2
P10809_1065
159.1
P10809_1111
143.5
Naive CD4 T-cell nTPM: 112.1
Samples: 6
Max nTPM: 125.8
Min nTPM: 94.5
P10809_1015
109.8
P10809_1030
94.5
P10809_1049
125.8
P10809_1068
124.2
P10809_1085
122.0
P10809_1112
96.0
Naive CD8 T-cell nTPM: 137.4
Samples: 6
Max nTPM: 172.8
Min nTPM: 101.7
P10809_1016
101.7
P10809_1031
158.7
P10809_1050
117.6
P10809_1069
168.4
P10809_1087
172.8
P10809_1110
105.4
T-reg nTPM: 217.5
Samples: 6
Max nTPM: 253.5
Min nTPM: 187.3
P10809_1018
208.8
P10809_1037
223.6
P10809_1056
187.3
P10809_1075
253.5
P10809_1094
237.1
P10809_1106
194.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
226.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 145.3
Samples: 4
Max nTPM: 217.8
Min nTPM: 74.6
RHH5202_R3573
193.5
RHH5230_R3602
74.6
RHH5259_R3631
95.2
RHH5288_R3660
217.8
Effector memory CD8 T-cell nTPM: 226.0
Samples: 4
Max nTPM: 313.6
Min nTPM: 137.1
RHH5203_R3574
313.6
RHH5231_R3603
255.4
RHH5260_R3632
137.1
RHH5289_R3661
197.8
MAIT T-cell nTPM: 157.1
Samples: 4
Max nTPM: 172.0
Min nTPM: 140.9
RHH5233_R3605
171.7
RHH5205_R3576
143.7
RHH5262_R3634
140.9
RHH5297_R3663
172.0
Memory CD4 T-cell TFH nTPM: 209.2
Samples: 4
Max nTPM: 263.7
Min nTPM: 171.1
RHH5300_R3666
171.1
RHH5236_R3608
263.7
RHH5265_R3637
194.1
RHH5208_R3579
207.9
Memory CD4 T-cell Th1 nTPM: 160.4
Samples: 4
Max nTPM: 237.4
Min nTPM: 111.0
RHH5210_R3581
157.1
RHH5302_R3668
237.4
RHH5238_R3610
111.0
RHH5267_R3639
135.9
Memory CD4 T-cell Th1/Th17 nTPM: 158.5
Samples: 4
Max nTPM: 242.9
Min nTPM: 56.7
RHH5303_R3669
242.9
RHH5211_R3582
230.6
RHH5239_R3611
56.7
RHH5268_R3640
103.9
Memory CD4 T-cell Th17 nTPM: 106.0
Samples: 4
Max nTPM: 148.4
Min nTPM: 73.0
RHH5304_R3670
101.4
RHH5212_R3583
148.4
RHH5240_R3612
73.0
RHH5269_R3641
101.0
Memory CD4 T-cell Th2 nTPM: 154.6
Samples: 4
Max nTPM: 170.5
Min nTPM: 122.6
RHH5305_R3671
163.2
RHH5213_R3584
170.5
RHH5241_R3613
161.9
RHH5270_R3642
122.6
Naive CD4 T-cell nTPM: 135.2
Samples: 4
Max nTPM: 183.3
Min nTPM: 96.0
RHH5306_R3672
149.6
RHH5214_R3585
183.3
RHH5242_R3614
111.9
RHH5271_R3643
96.0
Naive CD8 T-cell nTPM: 114.7
Samples: 4
Max nTPM: 154.7
Min nTPM: 69.7
RHH5201_R3572
122.0
RHH5229_R3601
69.7
RHH5258_R3630
154.7
RHH5287_R3659
112.5
Non-Vd2 gdTCR nTPM: 168.8
Samples: 4
Max nTPM: 247.8
Min nTPM: 74.8
RHH5235_R3607
74.8
RHH5264_R3636
247.8
RHH5207_R3578
178.0
RHH5299_R3665
174.4
T-reg nTPM: 180.2
Samples: 4
Max nTPM: 270.0
Min nTPM: 97.8
RHH5301_R3667
196.2
RHH5237_R3609
270.0
RHH5266_R3638
97.8
RHH5209_R3580
156.8
Terminal effector memory CD4 T-cell nTPM: 139.1
Samples: 2
Max nTPM: 187.6
Min nTPM: 90.5
RHH5243_R3615
90.5
RHH5272_R3644
187.6
Terminal effector memory CD8 T-cell nTPM: 200.9
Samples: 4
Max nTPM: 275.5
Min nTPM: 125.9
RHH5232_R3604
187.0
RHH5204_R3575
275.5
RHH5261_R3633
125.9
RHH5296_R3662
215.0
Vd2 gdTCR nTPM: 163.2
Samples: 4
Max nTPM: 269.4
Min nTPM: 109.4
RHH5234_R3606
109.4
RHH5206_R3577
269.4
RHH5263_R3635
123.8
RHH5298_R3664
150.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
