HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:15.4 nTPM
HPA Brain:26.2 nTPM
GTEx:15.4 nTPM
FANTOM5:18.5 Scaled Tags Per Million
Pig:24.7 nTPM
Mouse:13.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007961
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.2
Sample id Sample description nTPM
Hippocampus
nTPM: 26.2
1898 Male, age 80, left hemisphere 29.4
2529 Female, age 94, left hemisphere 28.3
2148 Female, age 91, left hemisphere 25.7
1855 Male, age 76, left hemisphere 25.5
1911 Female, age 85, right hemisphere 25.5
2621 Female, age 67, right hemisphere 22.5
Dentate gyrus
nTPM: 23.7
2530 Female, age 94, left hemisphere 32.6
2528 Male, age 74, both hemispheres 27.9
2010 Male, age 76, both hemispheres 22.6
2246 Female, age 85, both hemispheres 21.0
1927 Female, age 91, both hemispheres 20.4
2531 Female, age 67, both hemispheres 18.0
Entorhinal gyrus
nTPM: 23.3
2117 Female, age 91, right hemisphere 32.1
2764 Male, age 80, right hemisphere 24.1
1938 Female, age 85, left hemisphere 23.8
2613 Female, age 94, left hemisphere 21.6
1787 Male, age 76, left hemisphere 21.1
2686 Male, age 75, right hemisphere 17.4
Hippocampus, CA1
nTPM: 25.2
2527 Male, age 74, both hemispheres 30.1
1873 Female, age 85, both hemispheres 27.4
2749 Male, age 80, left hemisphere 27.1
2082 Female, age 91, right hemisphere 23.2
2045 Male, age 76, both hemispheres 18.4
Hippocampus, CA2
nTPM: 25.5
2249 Male, age 74, both hemispheres 31.5
1963 Male, age 80, left hemisphere 29.4
2113 Female, age 91, right hemisphere 24.3
1940 Female, age 85, left hemisphere 23.2
1892 Male, age 76, both hemispheres 22.9
2437 Female, age 94, left hemisphere 21.8
Hippocampus, CA3
nTPM: 23.7
2436 Male, age 74, both hemispheres 32.7
1891 Female, age 85, both hemispheres 25.2
1867 Male, age 76, both hemispheres 23.0
2137 Male, age 80, left hemisphere 21.4
2620 Female, age 94, left hemisphere 21.3
2861 Female, age 67, both hemispheres 18.9
Parahippocampal cortex
nTPM: 20.4
1933 Female, age 85, both hemispheres 23.1
2250 Female, age 67, right hemisphere 21.9
2692 Male, age 74, both hemispheres 21.6
1850 Male, age 80, both hemispheres 21.3
2622 Female, age 67, right hemisphere 20.9
1990 Female, age 91, right hemisphere 20.8
2018 Male, age 76, both hemispheres 20.0
2532 Female, age 72, left hemisphere 19.1
2245 Female, age 91, both hemispheres 18.8
2693 Female, age 94, both hemispheres 16.6
Perirhinal gyrus
nTPM: 19.6
1847 Female, age 91, left hemisphere 21.8
1794 Male, age 80, right hemisphere 21.2
1841 Female, age 85, right hemisphere 20.1
2521 Female, age 94, right hemisphere 18.6
2848 Male, age 76, right hemisphere 16.3
Subiculum
nTPM: 24.2
2729 Female, age 91, right hemisphere 30.2
2619 Male, age 74, both hemispheres 25.5
1901 Male, age 80, both hemispheres 25.2
2042 Male, age 76, both hemispheres 22.4
1977 Female, age 85, both hemispheres 22.1
2438 Female, age 94, left hemisphere 19.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.4
Samples: 197

Max nTPM: 26.5
Min nTPM: 3.1
Std nTPM: 4.8
Median nTPM: 15.5
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 26.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 26.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 25.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 25.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 25.4
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 25.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 24.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 24.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 24.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 24.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 24.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.5
FF:10153-102I9 76 years, female 21.5
FF:10169-103B7 60 years, female 15.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.7
Pig sample Sample description nTPM
Subiculum
nTPM: 24.0
Samples: 4

Max nTPM: 28.6
Min nTPM: 18.6
Sample A Female 28.6
Sample B Female 24.9
Sample C Male 23.9
Sample D Male 18.6
Dorsal hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 25.7
Min nTPM: 15.0
Sample A Female 25.7
Sample B Female 23.0
Sample C Male 21.7
Sample D Male 15.0
Entorhinal cortex
nTPM: 21.0
Samples: 4

Max nTPM: 22.5
Min nTPM: 18.2
Sample A Female 21.6
Sample B Female 21.6
Sample C Male 22.5
Sample D Male 18.2
Ventral hippocampus
nTPM: 24.8
Samples: 4

Max nTPM: 32.1
Min nTPM: 20.2
Sample A Female 25.5
Sample B Female 21.2
Sample C Male 32.1
Sample D Male 20.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.4
Samples: 4

Max nTPM: 13.1
Min nTPM: 9.5
Sample A Male 10.9
Sample B Male 9.5
Sample C Female 13.1
Sample D Female 11.9
Hippocampal formation
nTPM: 13.3
Samples: 4

Max nTPM: 15.4
Min nTPM: 11.4
Sample A Male 12.2
Sample B Male 11.4
Sample C Female 14.1
Sample D Female 15.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
70812744 Antisense, RP_050712_02_E06, Mouse strain C57BL/6J (56 days, male) 0.8
68302011 Antisense, RP_041130_02_C03, Mouse strain C57BL/6J (56 days, male) 0.3

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